Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19385 and AO356_19390 are separated by 7 nucleotides AO356_19390 and AO356_19395 are separated by 213 nucleotides
AO356_19385: AO356_19385 - MFS transporter, at 4,351,574 to 4,352,302
_19385
AO356_19390: AO356_19390 - hypothetical protein, at 4,352,310 to 4,352,492
_19390
AO356_19395: AO356_19395 - aminopeptidase, at 4,352,706 to 4,353,995
_19395
Position (kb)
4352
4353 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4351.349 kb on + strand at 4351.379 kb on - strand at 4351.385 kb on - strand at 4351.396 kb on - strand at 4351.406 kb on + strand at 4351.407 kb on - strand at 4351.490 kb on - strand at 4351.490 kb on - strand at 4351.490 kb on - strand at 4351.554 kb on - strand at 4351.562 kb on + strand at 4351.562 kb on + strand at 4351.562 kb on + strand at 4351.562 kb on + strand at 4351.563 kb on - strand at 4351.563 kb on - strand at 4351.563 kb on - strand at 4351.563 kb on - strand at 4351.566 kb on + strand at 4351.566 kb on + strand at 4351.567 kb on - strand at 4351.567 kb on - strand at 4351.567 kb on - strand at 4351.757 kb on + strand, within AO356_19385 at 4351.806 kb on - strand, within AO356_19385 at 4351.867 kb on + strand, within AO356_19385 at 4351.867 kb on + strand, within AO356_19385 at 4351.868 kb on - strand, within AO356_19385 at 4351.868 kb on - strand, within AO356_19385 at 4351.973 kb on - strand, within AO356_19385 at 4351.973 kb on - strand, within AO356_19385 at 4351.994 kb on + strand, within AO356_19385 at 4351.995 kb on - strand, within AO356_19385 at 4352.006 kb on + strand, within AO356_19385 at 4352.006 kb on + strand, within AO356_19385 at 4352.006 kb on + strand, within AO356_19385 at 4352.007 kb on - strand, within AO356_19385 at 4352.007 kb on - strand, within AO356_19385 at 4352.007 kb on - strand, within AO356_19385 at 4352.096 kb on + strand, within AO356_19385 at 4352.097 kb on - strand, within AO356_19385 at 4352.204 kb on + strand, within AO356_19385 at 4352.204 kb on + strand, within AO356_19385 at 4352.205 kb on - strand, within AO356_19385 at 4352.205 kb on - strand, within AO356_19385 at 4352.205 kb on - strand, within AO356_19385 at 4352.347 kb on - strand, within AO356_19390 at 4352.347 kb on - strand, within AO356_19390 at 4352.516 kb on + strand at 4352.527 kb on + strand at 4352.527 kb on + strand at 4352.662 kb on + strand at 4352.662 kb on + strand at 4352.728 kb on + strand at 4352.728 kb on + strand at 4352.728 kb on + strand at 4352.728 kb on + strand at 4352.728 kb on + strand at 4352.729 kb on - strand at 4352.729 kb on - strand at 4352.913 kb on + strand, within AO356_19395 at 4352.914 kb on - strand, within AO356_19395 at 4352.914 kb on - strand, within AO356_19395 at 4352.914 kb on - strand, within AO356_19395 at 4352.914 kb on - strand, within AO356_19395 at 4352.914 kb on - strand, within AO356_19395 at 4352.971 kb on + strand, within AO356_19395 at 4353.049 kb on + strand, within AO356_19395 at 4353.049 kb on + strand, within AO356_19395 at 4353.050 kb on - strand, within AO356_19395 at 4353.050 kb on - strand, within AO356_19395 at 4353.050 kb on - strand, within AO356_19395 at 4353.050 kb on - strand, within AO356_19395 at 4353.050 kb on - strand, within AO356_19395 at 4353.222 kb on + strand, within AO356_19395 at 4353.223 kb on - strand, within AO356_19395 at 4353.271 kb on + strand, within AO356_19395 at 4353.272 kb on - strand, within AO356_19395 at 4353.352 kb on + strand, within AO356_19395 at 4353.352 kb on + strand, within AO356_19395 at 4353.352 kb on + strand, within AO356_19395 at 4353.353 kb on - strand, within AO356_19395 at 4353.353 kb on - strand, within AO356_19395
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,351,349 + +0.5 4,351,379 - +0.2 4,351,385 - +0.1 4,351,396 - +0.2 4,351,406 + +0.9 4,351,407 - -0.0 4,351,490 - +1.2 4,351,490 - -0.5 4,351,490 - -0.9 4,351,554 - -0.9 4,351,562 + -2.2 4,351,562 + +0.4 4,351,562 + -0.2 4,351,562 + +0.1 4,351,563 - +1.4 4,351,563 - +0.2 4,351,563 - -1.3 4,351,563 - +0.6 4,351,566 + +0.6 4,351,566 + +0.3 4,351,567 - +1.7 4,351,567 - +1.0 4,351,567 - -0.5 4,351,757 + AO356_19385 0.25 -1.3 4,351,806 - AO356_19385 0.32 -0.1 4,351,867 + AO356_19385 0.40 -0.3 4,351,867 + AO356_19385 0.40 +0.7 4,351,868 - AO356_19385 0.40 -0.5 4,351,868 - AO356_19385 0.40 -1.0 4,351,973 - AO356_19385 0.55 +0.9 4,351,973 - AO356_19385 0.55 -1.2 4,351,994 + AO356_19385 0.58 +0.4 4,351,995 - AO356_19385 0.58 +0.2 4,352,006 + AO356_19385 0.59 +1.4 4,352,006 + AO356_19385 0.59 +0.2 4,352,006 + AO356_19385 0.59 +0.4 4,352,007 - AO356_19385 0.59 +0.1 4,352,007 - AO356_19385 0.59 +0.9 4,352,007 - AO356_19385 0.59 +0.1 4,352,096 + AO356_19385 0.72 +0.2 4,352,097 - AO356_19385 0.72 +1.0 4,352,204 + AO356_19385 0.86 -0.4 4,352,204 + AO356_19385 0.86 +0.1 4,352,205 - AO356_19385 0.87 -0.9 4,352,205 - AO356_19385 0.87 +1.2 4,352,205 - AO356_19385 0.87 -0.4 4,352,347 - AO356_19390 0.20 -1.0 4,352,347 - AO356_19390 0.20 -0.4 4,352,516 + -0.8 4,352,527 + +1.1 4,352,527 + -0.8 4,352,662 + +0.6 4,352,662 + +1.0 4,352,728 + -1.4 4,352,728 + -1.1 4,352,728 + -2.6 4,352,728 + +0.2 4,352,728 + +0.0 4,352,729 - +1.1 4,352,729 - -1.9 4,352,913 + AO356_19395 0.16 -1.3 4,352,914 - AO356_19395 0.16 -0.7 4,352,914 - AO356_19395 0.16 +1.0 4,352,914 - AO356_19395 0.16 +0.0 4,352,914 - AO356_19395 0.16 -0.3 4,352,914 - AO356_19395 0.16 -0.6 4,352,971 + AO356_19395 0.21 -0.1 4,353,049 + AO356_19395 0.27 +0.4 4,353,049 + AO356_19395 0.27 +0.7 4,353,050 - AO356_19395 0.27 -1.1 4,353,050 - AO356_19395 0.27 +0.2 4,353,050 - AO356_19395 0.27 -2.5 4,353,050 - AO356_19395 0.27 +0.3 4,353,050 - AO356_19395 0.27 -0.4 4,353,222 + AO356_19395 0.40 -3.5 4,353,223 - AO356_19395 0.40 -1.0 4,353,271 + AO356_19395 0.44 +1.0 4,353,272 - AO356_19395 0.44 -0.7 4,353,352 + AO356_19395 0.50 -1.9 4,353,352 + AO356_19395 0.50 -0.6 4,353,352 + AO356_19395 0.50 -1.5 4,353,353 - AO356_19395 0.50 -0.2 4,353,353 - AO356_19395 0.50 -2.3
Or see this region's nucleotide sequence