Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19250 and AO356_19255 are separated by 178 nucleotides AO356_19255 and AO356_19260 are separated by 118 nucleotides
AO356_19250: AO356_19250 - glycerol acyltransferase, at 4,322,043 to 4,323,917
_19250
AO356_19255: AO356_19255 - molecular chaperone, at 4,324,096 to 4,324,410
_19255
AO356_19260: AO356_19260 - sodium transporter, at 4,324,529 to 4,325,494
_19260
Position (kb)
4324
4325 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4323.096 kb on + strand, within AO356_19250 at 4323.096 kb on + strand, within AO356_19250 at 4323.096 kb on + strand, within AO356_19250 at 4323.096 kb on + strand, within AO356_19250 at 4323.096 kb on + strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.097 kb on - strand, within AO356_19250 at 4323.111 kb on + strand, within AO356_19250 at 4323.111 kb on + strand, within AO356_19250 at 4323.111 kb on + strand, within AO356_19250 at 4323.112 kb on - strand, within AO356_19250 at 4323.112 kb on - strand, within AO356_19250 at 4323.297 kb on + strand, within AO356_19250 at 4323.298 kb on - strand, within AO356_19250 at 4323.363 kb on + strand, within AO356_19250 at 4323.363 kb on + strand, within AO356_19250 at 4323.364 kb on - strand, within AO356_19250 at 4323.364 kb on - strand, within AO356_19250 at 4323.495 kb on + strand, within AO356_19250 at 4323.495 kb on + strand, within AO356_19250 at 4323.495 kb on + strand, within AO356_19250 at 4323.495 kb on + strand, within AO356_19250 at 4323.496 kb on - strand, within AO356_19250 at 4323.496 kb on - strand, within AO356_19250 at 4323.496 kb on - strand, within AO356_19250 at 4323.496 kb on - strand, within AO356_19250 at 4323.496 kb on - strand, within AO356_19250 at 4323.498 kb on + strand, within AO356_19250 at 4323.498 kb on + strand, within AO356_19250 at 4323.498 kb on + strand, within AO356_19250 at 4323.498 kb on + strand, within AO356_19250 at 4323.498 kb on + strand, within AO356_19250 at 4323.499 kb on - strand, within AO356_19250 at 4323.499 kb on - strand, within AO356_19250 at 4323.507 kb on + strand, within AO356_19250 at 4323.507 kb on + strand, within AO356_19250 at 4323.507 kb on + strand, within AO356_19250 at 4323.507 kb on + strand, within AO356_19250 at 4323.507 kb on + strand, within AO356_19250 at 4323.508 kb on - strand, within AO356_19250 at 4323.508 kb on - strand, within AO356_19250 at 4323.508 kb on - strand, within AO356_19250 at 4323.508 kb on - strand, within AO356_19250 at 4323.588 kb on + strand, within AO356_19250 at 4323.618 kb on + strand, within AO356_19250 at 4323.618 kb on + strand, within AO356_19250 at 4323.953 kb on - strand at 4323.953 kb on - strand at 4324.046 kb on + strand at 4324.047 kb on - strand at 4324.243 kb on - strand, within AO356_19255 at 4324.346 kb on + strand, within AO356_19255 at 4324.346 kb on + strand, within AO356_19255 at 4324.347 kb on - strand, within AO356_19255 at 4324.446 kb on + strand at 4324.456 kb on + strand at 4324.456 kb on + strand at 4324.456 kb on + strand at 4324.456 kb on + strand at 4324.456 kb on + strand at 4324.457 kb on - strand at 4324.590 kb on + strand at 4324.590 kb on + strand at 4324.591 kb on - strand at 4324.774 kb on - strand, within AO356_19260 at 4324.774 kb on - strand, within AO356_19260 at 4324.892 kb on + strand, within AO356_19260 at 4324.892 kb on + strand, within AO356_19260 at 4324.893 kb on - strand, within AO356_19260 at 4325.190 kb on - strand, within AO356_19260 at 4325.190 kb on - strand, within AO356_19260
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,323,096 + AO356_19250 0.56 +0.1 4,323,096 + AO356_19250 0.56 -0.5 4,323,096 + AO356_19250 0.56 -0.0 4,323,096 + AO356_19250 0.56 -1.4 4,323,096 + AO356_19250 0.56 +0.4 4,323,097 - AO356_19250 0.56 -1.3 4,323,097 - AO356_19250 0.56 +0.7 4,323,097 - AO356_19250 0.56 -0.4 4,323,097 - AO356_19250 0.56 -1.1 4,323,097 - AO356_19250 0.56 +0.8 4,323,097 - AO356_19250 0.56 -1.0 4,323,097 - AO356_19250 0.56 +3.0 4,323,111 + AO356_19250 0.57 +0.2 4,323,111 + AO356_19250 0.57 +0.8 4,323,111 + AO356_19250 0.57 +0.6 4,323,112 - AO356_19250 0.57 +1.3 4,323,112 - AO356_19250 0.57 +0.3 4,323,297 + AO356_19250 0.67 -0.1 4,323,298 - AO356_19250 0.67 -1.5 4,323,363 + AO356_19250 0.70 +0.3 4,323,363 + AO356_19250 0.70 -1.4 4,323,364 - AO356_19250 0.70 -1.4 4,323,364 - AO356_19250 0.70 +1.4 4,323,495 + AO356_19250 0.77 +0.6 4,323,495 + AO356_19250 0.77 +0.6 4,323,495 + AO356_19250 0.77 +0.4 4,323,495 + AO356_19250 0.77 +1.3 4,323,496 - AO356_19250 0.77 -0.7 4,323,496 - AO356_19250 0.77 +0.4 4,323,496 - AO356_19250 0.77 +1.9 4,323,496 - AO356_19250 0.77 -0.1 4,323,496 - AO356_19250 0.77 +0.2 4,323,498 + AO356_19250 0.78 -0.1 4,323,498 + AO356_19250 0.78 +0.2 4,323,498 + AO356_19250 0.78 +0.4 4,323,498 + AO356_19250 0.78 -1.9 4,323,498 + AO356_19250 0.78 +2.4 4,323,499 - AO356_19250 0.78 -0.6 4,323,499 - AO356_19250 0.78 -0.9 4,323,507 + AO356_19250 0.78 -0.1 4,323,507 + AO356_19250 0.78 -0.5 4,323,507 + AO356_19250 0.78 -0.0 4,323,507 + AO356_19250 0.78 +0.1 4,323,507 + AO356_19250 0.78 +0.3 4,323,508 - AO356_19250 0.78 -0.9 4,323,508 - AO356_19250 0.78 -0.1 4,323,508 - AO356_19250 0.78 +0.6 4,323,508 - AO356_19250 0.78 +1.0 4,323,588 + AO356_19250 0.82 +0.7 4,323,618 + AO356_19250 0.84 +1.5 4,323,618 + AO356_19250 0.84 +0.9 4,323,953 - +0.5 4,323,953 - +0.4 4,324,046 + +0.9 4,324,047 - +0.5 4,324,243 - AO356_19255 0.47 +1.0 4,324,346 + AO356_19255 0.79 +1.5 4,324,346 + AO356_19255 0.79 +1.9 4,324,347 - AO356_19255 0.80 -1.3 4,324,446 + -0.1 4,324,456 + -1.1 4,324,456 + +0.8 4,324,456 + -0.1 4,324,456 + -1.3 4,324,456 + -3.0 4,324,457 - +0.5 4,324,590 + +1.4 4,324,590 + +0.2 4,324,591 - -0.9 4,324,774 - AO356_19260 0.25 +1.5 4,324,774 - AO356_19260 0.25 +0.4 4,324,892 + AO356_19260 0.38 +0.1 4,324,892 + AO356_19260 0.38 +0.2 4,324,893 - AO356_19260 0.38 +1.2 4,325,190 - AO356_19260 0.68 +1.4 4,325,190 - AO356_19260 0.68 +0.6
Or see this region's nucleotide sequence