Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19220 and AO356_19225 are separated by 146 nucleotides AO356_19225 and AO356_19230 are separated by 237 nucleotides AO356_19230 and AO356_19235 are separated by 103 nucleotides
AO356_19220: AO356_19220 - recombinase RmuC, at 4,313,138 to 4,314,640
_19220
AO356_19225: AO356_19225 - histidine kinase, at 4,314,787 to 4,318,257
_19225
AO356_19230: AO356_19230 - TetR family transcriptional regulator, at 4,318,495 to 4,319,034
_19230
AO356_19235: AO356_19235 - MFS transporter, at 4,319,138 to 4,320,328
_19235
Position (kb) 4314
4315
4316
4317
4318
4319 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4313.857 kb on + strand, within AO356_19220 at 4313.858 kb on - strand, within AO356_19220 at 4313.922 kb on - strand, within AO356_19220 at 4313.984 kb on + strand, within AO356_19220 at 4313.984 kb on + strand, within AO356_19220 at 4313.984 kb on + strand, within AO356_19220 at 4313.984 kb on + strand, within AO356_19220 at 4314.038 kb on + strand, within AO356_19220 at 4314.038 kb on + strand, within AO356_19220 at 4314.038 kb on + strand, within AO356_19220 at 4314.047 kb on + strand, within AO356_19220 at 4314.047 kb on + strand, within AO356_19220 at 4314.048 kb on - strand, within AO356_19220 at 4314.048 kb on - strand, within AO356_19220 at 4314.048 kb on - strand, within AO356_19220 at 4314.099 kb on + strand, within AO356_19220 at 4314.099 kb on + strand, within AO356_19220 at 4314.099 kb on + strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.100 kb on - strand, within AO356_19220 at 4314.143 kb on + strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.144 kb on - strand, within AO356_19220 at 4314.455 kb on + strand, within AO356_19220 at 4314.455 kb on + strand, within AO356_19220 at 4314.456 kb on - strand, within AO356_19220 at 4314.456 kb on - strand, within AO356_19220 at 4314.456 kb on - strand, within AO356_19220 at 4314.681 kb on + strand at 4314.681 kb on + strand at 4314.681 kb on + strand at 4314.788 kb on + strand at 4314.789 kb on - strand at 4314.789 kb on - strand at 4314.851 kb on + strand at 4314.852 kb on - strand at 4315.093 kb on + strand at 4315.093 kb on + strand at 4315.094 kb on - strand at 4315.094 kb on - strand at 4315.261 kb on + strand, within AO356_19225 at 4315.262 kb on - strand, within AO356_19225 at 4315.272 kb on + strand, within AO356_19225 at 4315.273 kb on - strand, within AO356_19225 at 4315.273 kb on - strand, within AO356_19225 at 4315.273 kb on - strand, within AO356_19225 at 4315.453 kb on + strand, within AO356_19225 at 4315.526 kb on - strand, within AO356_19225 at 4315.689 kb on + strand, within AO356_19225 at 4315.877 kb on + strand, within AO356_19225 at 4315.877 kb on + strand, within AO356_19225 at 4316.107 kb on - strand, within AO356_19225 at 4316.107 kb on - strand, within AO356_19225 at 4316.196 kb on - strand, within AO356_19225 at 4316.246 kb on + strand, within AO356_19225 at 4316.470 kb on + strand, within AO356_19225 at 4316.470 kb on + strand, within AO356_19225 at 4316.471 kb on - strand, within AO356_19225 at 4316.897 kb on + strand, within AO356_19225 at 4316.897 kb on + strand, within AO356_19225 at 4316.897 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.068 kb on + strand, within AO356_19225 at 4317.069 kb on - strand, within AO356_19225 at 4317.069 kb on - strand, within AO356_19225 at 4317.399 kb on - strand, within AO356_19225 at 4317.399 kb on - strand, within AO356_19225 at 4317.409 kb on + strand, within AO356_19225 at 4317.551 kb on + strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.608 kb on + strand, within AO356_19225 at 4317.608 kb on + strand, within AO356_19225 at 4317.609 kb on - strand, within AO356_19225 at 4317.617 kb on + strand, within AO356_19225 at 4317.617 kb on + strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4318.040 kb on + strand at 4318.041 kb on - strand at 4318.041 kb on - strand at 4318.041 kb on - strand at 4318.044 kb on + strand at 4318.044 kb on + strand at 4318.044 kb on + strand at 4318.045 kb on - strand at 4318.045 kb on - strand at 4318.045 kb on - strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.133 kb on + strand at 4318.212 kb on + strand at 4318.213 kb on - strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.373 kb on - strand at 4318.444 kb on + strand at 4318.444 kb on + strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.526 kb on + strand at 4318.527 kb on - strand at 4318.675 kb on + strand, within AO356_19230 at 4318.682 kb on + strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.723 kb on - strand, within AO356_19230 at 4318.723 kb on - strand, within AO356_19230 at 4318.754 kb on + strand, within AO356_19230 at 4318.755 kb on - strand, within AO356_19230 at 4318.877 kb on + strand, within AO356_19230 at 4318.881 kb on + strand, within AO356_19230 at 4318.881 kb on + strand, within AO356_19230 at 4319.014 kb on + strand at 4319.014 kb on + strand at 4319.015 kb on - strand at 4319.015 kb on - strand at 4319.015 kb on - strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.028 kb on + strand at 4319.028 kb on + strand at 4319.028 kb on + strand at 4319.046 kb on + strand at 4319.185 kb on + strand at 4319.185 kb on + strand at 4319.186 kb on - strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.240 kb on + strand at 4319.241 kb on - strand at 4319.241 kb on - strand at 4319.253 kb on + strand at 4319.253 kb on + strand at 4319.253 kb on + strand at 4319.254 kb on - strand at 4319.254 kb on - strand at 4319.254 kb on - strand at 4319.254 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,313,857 + AO356_19220 0.48 -0.9 4,313,858 - AO356_19220 0.48 -0.3 4,313,922 - AO356_19220 0.52 +0.1 4,313,984 + AO356_19220 0.56 -0.6 4,313,984 + AO356_19220 0.56 -0.6 4,313,984 + AO356_19220 0.56 +1.1 4,313,984 + AO356_19220 0.56 -1.0 4,314,038 + AO356_19220 0.60 -1.1 4,314,038 + AO356_19220 0.60 +0.2 4,314,038 + AO356_19220 0.60 -0.1 4,314,047 + AO356_19220 0.60 -0.5 4,314,047 + AO356_19220 0.60 -1.0 4,314,048 - AO356_19220 0.61 -1.5 4,314,048 - AO356_19220 0.61 -0.5 4,314,048 - AO356_19220 0.61 -1.7 4,314,099 + AO356_19220 0.64 +0.5 4,314,099 + AO356_19220 0.64 -0.2 4,314,099 + AO356_19220 0.64 -0.5 4,314,100 - AO356_19220 0.64 +0.4 4,314,100 - AO356_19220 0.64 -1.5 4,314,100 - AO356_19220 0.64 -0.4 4,314,100 - AO356_19220 0.64 -0.8 4,314,100 - AO356_19220 0.64 +1.3 4,314,100 - AO356_19220 0.64 +0.1 4,314,100 - AO356_19220 0.64 -0.3 4,314,100 - AO356_19220 0.64 +0.8 4,314,100 - AO356_19220 0.64 +1.9 4,314,100 - AO356_19220 0.64 -1.9 4,314,100 - AO356_19220 0.64 -2.3 4,314,100 - AO356_19220 0.64 -0.4 4,314,100 - AO356_19220 0.64 -0.9 4,314,143 + AO356_19220 0.67 -0.2 4,314,144 - AO356_19220 0.67 -1.0 4,314,144 - AO356_19220 0.67 -1.7 4,314,144 - AO356_19220 0.67 +1.2 4,314,144 - AO356_19220 0.67 +0.6 4,314,144 - AO356_19220 0.67 +0.5 4,314,144 - AO356_19220 0.67 +0.2 4,314,144 - AO356_19220 0.67 -1.0 4,314,455 + AO356_19220 0.88 -1.0 4,314,455 + AO356_19220 0.88 -0.4 4,314,456 - AO356_19220 0.88 -0.2 4,314,456 - AO356_19220 0.88 -0.4 4,314,456 - AO356_19220 0.88 -0.2 4,314,681 + -3.5 4,314,681 + +0.2 4,314,681 + -0.8 4,314,788 + +0.3 4,314,789 - +0.3 4,314,789 - -0.9 4,314,851 + +0.6 4,314,852 - -0.3 4,315,093 + -0.8 4,315,093 + +0.7 4,315,094 - +0.5 4,315,094 - +0.9 4,315,261 + AO356_19225 0.14 -1.7 4,315,262 - AO356_19225 0.14 +1.1 4,315,272 + AO356_19225 0.14 +0.4 4,315,273 - AO356_19225 0.14 +1.0 4,315,273 - AO356_19225 0.14 +0.9 4,315,273 - AO356_19225 0.14 +0.2 4,315,453 + AO356_19225 0.19 -1.4 4,315,526 - AO356_19225 0.21 -1.6 4,315,689 + AO356_19225 0.26 -0.2 4,315,877 + AO356_19225 0.31 +0.8 4,315,877 + AO356_19225 0.31 +0.7 4,316,107 - AO356_19225 0.38 -2.1 4,316,107 - AO356_19225 0.38 +0.4 4,316,196 - AO356_19225 0.41 +0.5 4,316,246 + AO356_19225 0.42 -0.1 4,316,470 + AO356_19225 0.48 -0.7 4,316,470 + AO356_19225 0.48 -0.2 4,316,471 - AO356_19225 0.49 +0.8 4,316,897 + AO356_19225 0.61 -0.6 4,316,897 + AO356_19225 0.61 +0.5 4,316,897 + AO356_19225 0.61 -0.2 4,317,068 + AO356_19225 0.66 +0.4 4,317,068 + AO356_19225 0.66 -0.3 4,317,068 + AO356_19225 0.66 +0.4 4,317,068 + AO356_19225 0.66 -0.3 4,317,068 + AO356_19225 0.66 +0.2 4,317,068 + AO356_19225 0.66 +0.2 4,317,069 - AO356_19225 0.66 +0.1 4,317,069 - AO356_19225 0.66 +0.3 4,317,399 - AO356_19225 0.75 +1.1 4,317,399 - AO356_19225 0.75 +0.3 4,317,409 + AO356_19225 0.76 -0.5 4,317,551 + AO356_19225 0.80 +0.4 4,317,552 - AO356_19225 0.80 +0.8 4,317,552 - AO356_19225 0.80 -2.6 4,317,552 - AO356_19225 0.80 -1.9 4,317,552 - AO356_19225 0.80 +0.2 4,317,608 + AO356_19225 0.81 -0.4 4,317,608 + AO356_19225 0.81 +0.1 4,317,609 - AO356_19225 0.81 -1.3 4,317,617 + AO356_19225 0.82 -0.2 4,317,617 + AO356_19225 0.82 -0.2 4,317,618 - AO356_19225 0.82 +0.5 4,317,618 - AO356_19225 0.82 +0.1 4,317,618 - AO356_19225 0.82 -0.6 4,317,618 - AO356_19225 0.82 +0.2 4,317,867 - AO356_19225 0.89 -0.0 4,317,867 - AO356_19225 0.89 -0.7 4,317,867 - AO356_19225 0.89 -0.0 4,317,867 - AO356_19225 0.89 +1.1 4,318,040 + +0.2 4,318,041 - +0.5 4,318,041 - -0.7 4,318,041 - +0.1 4,318,044 + -0.2 4,318,044 + +1.5 4,318,044 + +0.7 4,318,045 - +1.4 4,318,045 - -0.2 4,318,045 - +1.0 4,318,112 + +0.5 4,318,112 + -0.3 4,318,112 + -2.3 4,318,112 + +0.8 4,318,112 + -0.1 4,318,112 + +1.3 4,318,113 - +1.5 4,318,113 - +1.2 4,318,113 - +1.0 4,318,113 - +0.8 4,318,133 + -0.7 4,318,212 + +0.4 4,318,213 - -0.7 4,318,214 + -1.5 4,318,214 + -0.2 4,318,214 + +0.5 4,318,214 + -2.0 4,318,214 + -2.3 4,318,214 + -0.5 4,318,214 + +0.4 4,318,214 + +0.3 4,318,214 + -1.1 4,318,215 - +0.4 4,318,215 - -1.2 4,318,215 - +0.3 4,318,215 - -0.1 4,318,215 - +1.4 4,318,215 - +0.1 4,318,373 - +1.4 4,318,444 + -0.0 4,318,444 + +0.5 4,318,445 - +1.8 4,318,445 - -0.2 4,318,445 - -0.9 4,318,445 - +0.1 4,318,445 - +0.1 4,318,445 - -0.6 4,318,526 + +0.2 4,318,527 - -0.0 4,318,675 + AO356_19230 0.33 -1.0 4,318,682 + AO356_19230 0.35 -0.5 4,318,683 - AO356_19230 0.35 +0.4 4,318,683 - AO356_19230 0.35 -0.0 4,318,683 - AO356_19230 0.35 -0.6 4,318,723 - AO356_19230 0.42 +1.9 4,318,723 - AO356_19230 0.42 -2.7 4,318,754 + AO356_19230 0.48 -0.9 4,318,755 - AO356_19230 0.48 +0.5 4,318,877 + AO356_19230 0.71 -0.2 4,318,881 + AO356_19230 0.71 +0.8 4,318,881 + AO356_19230 0.71 +0.3 4,319,014 + +0.1 4,319,014 + -0.3 4,319,015 - -0.7 4,319,015 - +0.7 4,319,015 - -0.0 4,319,025 + +0.1 4,319,025 + +0.4 4,319,025 + -1.0 4,319,025 + +0.5 4,319,026 - +0.4 4,319,026 - +1.1 4,319,026 - +1.4 4,319,026 - -0.8 4,319,026 - +0.9 4,319,026 - +0.7 4,319,028 + -0.9 4,319,028 + +1.4 4,319,028 + -1.0 4,319,046 + +0.7 4,319,185 + -0.7 4,319,185 + -1.1 4,319,186 - +0.6 4,319,231 + +0.6 4,319,231 + -0.0 4,319,231 + -1.6 4,319,231 + +0.1 4,319,232 - +0.2 4,319,232 - -0.3 4,319,232 - +0.3 4,319,232 - -0.4 4,319,240 + +1.3 4,319,241 - +1.1 4,319,241 - +0.6 4,319,253 + -1.2 4,319,253 + +0.3 4,319,253 + +0.1 4,319,254 - -0.1 4,319,254 - +0.7 4,319,254 - -0.5 4,319,254 - -0.9
Or see this region's nucleotide sequence