Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19160 and AO356_19165 are separated by 151 nucleotides AO356_19165 and AO356_19170 overlap by 4 nucleotides
AO356_19160: AO356_19160 - cobyric acid synthase, at 4,302,332 to 4,303,783
_19160
AO356_19165: AO356_19165 - adenosylcobinamide kinase, at 4,303,935 to 4,304,456
_19165
AO356_19170: AO356_19170 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,304,453 to 4,305,508
_19170
Position (kb)
4303
4304
4305 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4303.004 kb on + strand, within AO356_19160 at 4303.005 kb on - strand, within AO356_19160 at 4303.245 kb on - strand, within AO356_19160 at 4303.293 kb on - strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.604 kb on + strand, within AO356_19160 at 4303.605 kb on - strand, within AO356_19160 at 4303.688 kb on + strand at 4303.781 kb on + strand at 4303.782 kb on - strand at 4303.782 kb on - strand at 4303.851 kb on + strand at 4303.851 kb on + strand at 4303.851 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.855 kb on + strand at 4303.856 kb on - strand at 4303.856 kb on - strand at 4303.856 kb on - strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.919 kb on + strand at 4303.971 kb on - strand at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.022 kb on + strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.023 kb on - strand, within AO356_19165 at 4304.445 kb on - strand at 4304.445 kb on - strand at 4305.200 kb on + strand, within AO356_19170 at 4305.200 kb on + strand, within AO356_19170 at 4305.200 kb on + strand, within AO356_19170 at 4305.201 kb on - strand, within AO356_19170 at 4305.201 kb on - strand, within AO356_19170 at 4305.201 kb on - strand, within AO356_19170 at 4305.201 kb on - strand, within AO356_19170 at 4305.201 kb on - strand, within AO356_19170 at 4305.253 kb on + strand, within AO356_19170
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,303,004 + AO356_19160 0.46 +0.5 4,303,005 - AO356_19160 0.46 +0.6 4,303,245 - AO356_19160 0.63 +1.3 4,303,293 - AO356_19160 0.66 +1.2 4,303,604 + AO356_19160 0.88 +0.2 4,303,604 + AO356_19160 0.88 +0.6 4,303,604 + AO356_19160 0.88 +0.0 4,303,604 + AO356_19160 0.88 -1.1 4,303,604 + AO356_19160 0.88 +2.1 4,303,605 - AO356_19160 0.88 +0.6 4,303,688 + +1.4 4,303,781 + +0.8 4,303,782 - +0.7 4,303,782 - -1.2 4,303,851 + -0.6 4,303,851 + +1.1 4,303,851 + +0.0 4,303,855 + +0.6 4,303,855 + +0.9 4,303,855 + -0.9 4,303,855 + +0.1 4,303,855 + +0.8 4,303,856 - -0.1 4,303,856 - -0.1 4,303,856 - +0.7 4,303,919 + -0.4 4,303,919 + -1.3 4,303,919 + +0.9 4,303,919 + +1.0 4,303,971 - -2.0 4,304,022 + AO356_19165 0.17 -1.8 4,304,022 + AO356_19165 0.17 +0.8 4,304,022 + AO356_19165 0.17 +0.5 4,304,022 + AO356_19165 0.17 +0.7 4,304,022 + AO356_19165 0.17 +1.4 4,304,023 - AO356_19165 0.17 +1.5 4,304,023 - AO356_19165 0.17 +1.8 4,304,023 - AO356_19165 0.17 -1.2 4,304,445 - +2.6 4,304,445 - +1.1 4,305,200 + AO356_19170 0.71 +1.3 4,305,200 + AO356_19170 0.71 +1.6 4,305,200 + AO356_19170 0.71 +1.0 4,305,201 - AO356_19170 0.71 -0.3 4,305,201 - AO356_19170 0.71 +0.4 4,305,201 - AO356_19170 0.71 -0.3 4,305,201 - AO356_19170 0.71 +2.2 4,305,201 - AO356_19170 0.71 -0.2 4,305,253 + AO356_19170 0.76 +0.6
Or see this region's nucleotide sequence