Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18945 and AO356_18950 are separated by 112 nucleotides AO356_18950 and AO356_18955 are separated by 170 nucleotides
AO356_18945: AO356_18945 - histidine kinase, at 4,259,713 to 4,261,323
_18945
AO356_18950: AO356_18950 - 4'-phosphopantetheinyl transferase, at 4,261,436 to 4,262,170
_18950
AO356_18955: AO356_18955 - dienelactone hydrolase, at 4,262,341 to 4,263,132
_18955
Position (kb)
4261
4262
4263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4260.463 kb on + strand, within AO356_18945 at 4260.464 kb on - strand, within AO356_18945 at 4260.464 kb on - strand, within AO356_18945 at 4260.464 kb on - strand, within AO356_18945 at 4260.464 kb on - strand, within AO356_18945 at 4260.464 kb on - strand, within AO356_18945 at 4260.745 kb on - strand, within AO356_18945 at 4260.748 kb on + strand, within AO356_18945 at 4260.749 kb on - strand, within AO356_18945 at 4260.749 kb on - strand, within AO356_18945 at 4260.749 kb on - strand, within AO356_18945 at 4260.749 kb on - strand, within AO356_18945 at 4260.749 kb on - strand, within AO356_18945 at 4260.811 kb on + strand, within AO356_18945 at 4260.811 kb on + strand, within AO356_18945 at 4260.811 kb on + strand, within AO356_18945 at 4260.812 kb on - strand, within AO356_18945 at 4260.812 kb on - strand, within AO356_18945 at 4260.812 kb on - strand, within AO356_18945 at 4260.935 kb on + strand, within AO356_18945 at 4260.935 kb on + strand, within AO356_18945 at 4260.935 kb on + strand, within AO356_18945 at 4260.935 kb on + strand, within AO356_18945 at 4260.936 kb on - strand, within AO356_18945 at 4260.936 kb on - strand, within AO356_18945 at 4260.936 kb on - strand, within AO356_18945 at 4260.936 kb on - strand, within AO356_18945 at 4260.936 kb on - strand, within AO356_18945 at 4261.060 kb on + strand, within AO356_18945 at 4261.060 kb on + strand, within AO356_18945 at 4261.061 kb on - strand, within AO356_18945 at 4262.335 kb on + strand at 4262.408 kb on + strand at 4262.408 kb on + strand at 4262.408 kb on + strand at 4262.408 kb on + strand at 4262.409 kb on - strand at 4262.409 kb on - strand at 4262.502 kb on + strand, within AO356_18955 at 4262.503 kb on - strand, within AO356_18955 at 4262.503 kb on - strand, within AO356_18955 at 4262.503 kb on - strand, within AO356_18955 at 4262.593 kb on + strand, within AO356_18955 at 4262.593 kb on + strand, within AO356_18955 at 4262.593 kb on + strand, within AO356_18955 at 4262.593 kb on + strand, within AO356_18955 at 4262.594 kb on - strand, within AO356_18955 at 4262.594 kb on - strand, within AO356_18955 at 4262.594 kb on - strand, within AO356_18955 at 4262.675 kb on - strand, within AO356_18955 at 4262.879 kb on + strand, within AO356_18955 at 4262.879 kb on + strand, within AO356_18955 at 4262.880 kb on - strand, within AO356_18955 at 4262.880 kb on - strand, within AO356_18955 at 4262.880 kb on - strand, within AO356_18955 at 4262.880 kb on - strand, within AO356_18955 at 4262.904 kb on - strand, within AO356_18955 at 4262.942 kb on + strand, within AO356_18955 at 4263.011 kb on + strand, within AO356_18955 at 4263.011 kb on + strand, within AO356_18955 at 4263.012 kb on - strand, within AO356_18955 at 4263.017 kb on + strand, within AO356_18955 at 4263.017 kb on + strand, within AO356_18955 at 4263.017 kb on + strand, within AO356_18955 at 4263.017 kb on + strand, within AO356_18955 at 4263.017 kb on + strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.018 kb on - strand, within AO356_18955 at 4263.021 kb on - strand, within AO356_18955 at 4263.053 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.109 kb on + strand at 4263.110 kb on - strand at 4263.110 kb on - strand at 4263.145 kb on + strand at 4263.145 kb on + strand at 4263.145 kb on + strand at 4263.145 kb on + strand at 4263.167 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,260,463 + AO356_18945 0.47 +0.2 4,260,464 - AO356_18945 0.47 +0.1 4,260,464 - AO356_18945 0.47 -0.3 4,260,464 - AO356_18945 0.47 -0.3 4,260,464 - AO356_18945 0.47 +1.0 4,260,464 - AO356_18945 0.47 +0.9 4,260,745 - AO356_18945 0.64 +0.9 4,260,748 + AO356_18945 0.64 +0.7 4,260,749 - AO356_18945 0.64 +0.1 4,260,749 - AO356_18945 0.64 +0.6 4,260,749 - AO356_18945 0.64 +0.5 4,260,749 - AO356_18945 0.64 -1.5 4,260,749 - AO356_18945 0.64 -1.4 4,260,811 + AO356_18945 0.68 +0.1 4,260,811 + AO356_18945 0.68 -0.2 4,260,811 + AO356_18945 0.68 -0.9 4,260,812 - AO356_18945 0.68 +1.0 4,260,812 - AO356_18945 0.68 -1.8 4,260,812 - AO356_18945 0.68 -1.2 4,260,935 + AO356_18945 0.76 +0.7 4,260,935 + AO356_18945 0.76 -2.6 4,260,935 + AO356_18945 0.76 -0.5 4,260,935 + AO356_18945 0.76 -1.4 4,260,936 - AO356_18945 0.76 +0.2 4,260,936 - AO356_18945 0.76 -0.0 4,260,936 - AO356_18945 0.76 -0.8 4,260,936 - AO356_18945 0.76 +1.0 4,260,936 - AO356_18945 0.76 +0.4 4,261,060 + AO356_18945 0.84 -0.9 4,261,060 + AO356_18945 0.84 -0.5 4,261,061 - AO356_18945 0.84 +0.5 4,262,335 + -0.6 4,262,408 + +0.7 4,262,408 + -0.5 4,262,408 + +0.8 4,262,408 + -1.0 4,262,409 - +0.9 4,262,409 - -0.9 4,262,502 + AO356_18955 0.20 -0.6 4,262,503 - AO356_18955 0.20 -0.5 4,262,503 - AO356_18955 0.20 -1.3 4,262,503 - AO356_18955 0.20 -1.0 4,262,593 + AO356_18955 0.32 -2.0 4,262,593 + AO356_18955 0.32 -0.5 4,262,593 + AO356_18955 0.32 +0.6 4,262,593 + AO356_18955 0.32 -0.3 4,262,594 - AO356_18955 0.32 -0.5 4,262,594 - AO356_18955 0.32 +0.1 4,262,594 - AO356_18955 0.32 +0.4 4,262,675 - AO356_18955 0.42 +0.6 4,262,879 + AO356_18955 0.68 -0.6 4,262,879 + AO356_18955 0.68 -0.8 4,262,880 - AO356_18955 0.68 +0.4 4,262,880 - AO356_18955 0.68 -0.1 4,262,880 - AO356_18955 0.68 +0.2 4,262,880 - AO356_18955 0.68 -0.5 4,262,904 - AO356_18955 0.71 +1.1 4,262,942 + AO356_18955 0.76 -0.4 4,263,011 + AO356_18955 0.85 -0.3 4,263,011 + AO356_18955 0.85 +0.6 4,263,012 - AO356_18955 0.85 -0.2 4,263,017 + AO356_18955 0.85 -1.3 4,263,017 + AO356_18955 0.85 +1.0 4,263,017 + AO356_18955 0.85 +0.4 4,263,017 + AO356_18955 0.85 +0.1 4,263,017 + AO356_18955 0.85 +0.5 4,263,018 - AO356_18955 0.85 -0.6 4,263,018 - AO356_18955 0.85 -1.8 4,263,018 - AO356_18955 0.85 +0.4 4,263,018 - AO356_18955 0.85 -1.6 4,263,018 - AO356_18955 0.85 +1.1 4,263,018 - AO356_18955 0.85 -0.5 4,263,018 - AO356_18955 0.85 -1.2 4,263,018 - AO356_18955 0.85 -0.4 4,263,018 - AO356_18955 0.85 -0.2 4,263,018 - AO356_18955 0.85 +1.1 4,263,021 - AO356_18955 0.86 -2.5 4,263,053 + +1.1 4,263,109 + -0.3 4,263,109 + -1.9 4,263,109 + +0.4 4,263,109 + +0.8 4,263,109 + +0.5 4,263,109 + -0.7 4,263,109 + +1.4 4,263,109 + +1.3 4,263,109 + -0.0 4,263,109 + +0.1 4,263,110 - +0.0 4,263,110 - -1.8 4,263,145 + +1.8 4,263,145 + +0.0 4,263,145 + +0.5 4,263,145 + +0.2 4,263,167 + +1.0
Or see this region's nucleotide sequence