Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16990

Experiment: methylglyoxal 0.016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.016 vol%
3,826,928	-		AO356_16980	0.34	-1.3
3,826,928	-		AO356_16980	0.34	-0.5
3,826,928	-		AO356_16980	0.34	+1.2
3,826,928	-		AO356_16980	0.34	+0.6
3,826,981	+		AO356_16980	0.40	+0.2
3,826,981	+		AO356_16980	0.40	-1.3
3,826,981	+		AO356_16980	0.40	+0.1
3,826,981	+		AO356_16980	0.40	-0.0
3,826,994	-		AO356_16980	0.42	+0.1
3,826,994	-		AO356_16980	0.42	-0.1
3,826,994	-		AO356_16980	0.42	+1.3
3,827,002	+		AO356_16980	0.43	-1.0
3,827,002	+		AO356_16980	0.43	+0.4
3,827,002	+		AO356_16980	0.43	+0.4
3,827,003	-		AO356_16980	0.43	+0.4
3,827,003	-		AO356_16980	0.43	+0.4
3,827,156	-		AO356_16980	0.60	+1.6
3,827,185	+		AO356_16980	0.63	-0.5
3,827,257	+		AO356_16980	0.71	+0.3
3,827,257	+		AO356_16980	0.71	-1.8
3,827,257	+		AO356_16980	0.71	-0.3
3,827,257	+		AO356_16980	0.71	-0.6
3,827,257	+		AO356_16980	0.71	+1.8
3,827,258	-		AO356_16980	0.71	+0.5
3,827,258	-		AO356_16980	0.71	+0.4
3,827,258	-		AO356_16980	0.71	-0.4
3,827,320	+		AO356_16980	0.78	+0.4
3,827,320	+		AO356_16980	0.78	+1.4
3,827,320	+		AO356_16980	0.78	+1.2
3,827,320	+		AO356_16980	0.78	-0.8
3,827,321	-		AO356_16980	0.78	+1.1
3,827,321	-		AO356_16980	0.78	-0.4
3,827,350	+		AO356_16980	0.82	+0.5
3,827,350	+		AO356_16980	0.82	-0.9
3,827,350	+		AO356_16980	0.82	+1.5
3,827,350	+		AO356_16980	0.82	+1.5
3,827,350	+		AO356_16980	0.82	+0.7
3,827,351	-		AO356_16980	0.82	+1.7
3,827,351	-		AO356_16980	0.82	+3.1
3,827,351	-		AO356_16980	0.82	+1.3
3,827,351	-		AO356_16980	0.82	+0.9
3,827,351	-		AO356_16980	0.82	-0.2
3,827,351	-		AO356_16980	0.82	+0.3
3,827,351	-		AO356_16980	0.82	+1.9
3,827,351	-		AO356_16980	0.82	+1.5
3,827,359	+		AO356_16980	0.83	+1.0
3,827,359	+		AO356_16980	0.83	+0.6
3,827,360	-		AO356_16980	0.83	+0.7
3,827,360	-		AO356_16980	0.83	-1.0
3,827,360	-		AO356_16980	0.83	+1.1
3,827,360	-		AO356_16980	0.83	+1.7
3,827,360	-		AO356_16980	0.83	+0.6
3,827,360	-		AO356_16980	0.83	+0.9
3,827,500	+				+1.1
3,827,500	+				+0.3
3,827,501	-				-0.4
3,827,501	-				+0.6
3,827,501	-				-1.2
3,827,509	+				+0.5
3,827,509	+				+0.5
3,827,510	-				-1.9
3,827,510	-				+2.4
3,827,649	+				-0.5
3,827,649	+				-0.1
3,827,649	+				+2.3
3,827,649	+				+0.6
3,827,649	+				+0.9
3,827,697	+				+0.4
3,827,697	+				-0.5
3,827,698	-				-0.5
3,827,712	+				+0.1
3,827,713	-				+0.3
3,827,713	-				-1.3
3,827,743	-				-0.5
3,827,743	-				+0.3
3,827,752	-				+0.1
3,827,811	+				+1.6
3,827,812	-				+1.7
3,827,812	-				+1.3
3,827,836	+				+0.2
3,827,836	+				+1.0
3,827,836	+				+0.5
3,827,836	+				+0.1
3,827,836	+				+0.9
3,827,837	-				-0.8
3,827,837	-				+0.5
3,827,837	-				-0.3
3,827,837	-				-2.3
3,827,837	-				+0.3
3,827,837	-				-2.1
3,827,837	-				-0.0
3,827,837	-				-1.7
3,827,837	-				-0.0
3,827,842	-				+0.4
3,827,842	-				-1.1
3,827,842	-				+0.2
3,827,842	-				+0.1
3,827,842	-				+0.9
3,827,873	+				-0.1
3,827,873	+				+1.3
3,827,873	+				-2.1
3,827,873	+				+0.9
3,827,873	+				+0.7
3,827,873	+				+0.5
3,827,873	+				+0.5
3,827,874	-		AO356_16990	0.10	+0.8
3,827,874	-		AO356_16990	0.10	+0.9
3,827,874	-		AO356_16990	0.10	-1.1
3,827,874	-		AO356_16990	0.10	+0.8
3,828,000	+		AO356_16990	0.50	+0.0
3,828,000	+		AO356_16990	0.50	+0.5
3,828,000	+		AO356_16990	0.50	-0.4
3,828,000	+		AO356_16990	0.50	+0.6
3,828,000	+		AO356_16990	0.50	+1.3
3,828,000	+		AO356_16990	0.50	+0.1
3,828,000	+		AO356_16990	0.50	-0.3
3,828,000	+		AO356_16990	0.50	+0.9
3,828,001	-		AO356_16990	0.50	-0.6
3,828,001	-		AO356_16990	0.50	+0.6
3,828,001	-		AO356_16990	0.50	-1.0
3,828,001	-		AO356_16990	0.50	+0.1
3,828,001	-		AO356_16990	0.50	-0.3
3,828,001	-		AO356_16990	0.50	-0.0
3,828,001	-		AO356_16990	0.50	-0.7
3,828,001	-		AO356_16990	0.50	-0.5
3,828,001	-		AO356_16990	0.50	+1.5
3,828,001	-		AO356_16990	0.50	+0.6
3,828,001	-		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	-0.1
3,828,001	-		AO356_16990	0.50	-0.7
3,828,001	-		AO356_16990	0.50	+0.9
3,828,001	-		AO356_16990	0.50	-1.0
3,828,001	-		AO356_16990	0.50	+0.3
3,828,051	+		AO356_16990	0.66	-2.8
3,828,052	-		AO356_16990	0.67	-0.1
3,828,165	+				+0.0
3,828,165	+				+0.5
3,828,165	+				-1.3
3,828,165	+				+0.6
3,828,165	+				+0.9
3,828,165	+				+0.3
3,828,166	-				+0.5
3,828,166	-				+1.1
3,828,166	-				-0.3
3,828,166	-				-1.3
3,828,166	-				-0.1
3,828,166	-				-0.7
3,828,166	-				-1.2
3,828,166	-				+0.5
3,828,166	-				+0.0
3,828,166	-				-0.2
3,828,351	+				-0.1
3,828,351	+				-0.8
3,828,351	+				+0.2
3,828,351	+				+1.3
3,828,351	+				-1.2
3,828,351	+				-0.0
3,828,351	+				-0.1
3,828,352	-				-0.1
3,828,352	-				-0.1
3,828,491	+		AO356_16995	0.20	+0.5
3,828,678	-		AO356_16995	0.47	+0.9
3,828,678	-		AO356_16995	0.47	-2.8
3,828,678	-		AO356_16995	0.47	+0.6
3,828,696	+		AO356_16995	0.49	+1.7
3,828,729	+		AO356_16995	0.54	+0.4
3,828,729	+		AO356_16995	0.54	+0.4
3,828,729	+		AO356_16995	0.54	+0.7
3,828,729	+		AO356_16995	0.54	-0.4
3,828,730	-		AO356_16995	0.54	+0.1
3,828,730	-		AO356_16995	0.54	+0.4
3,828,730	-		AO356_16995	0.54	+0.5
3,828,838	-		AO356_16995	0.70	+1.1
3,828,979	+		AO356_16995	0.90	-0.1
3,828,996	+				-1.6
3,829,022	+				+0.7
3,829,023	-				+0.3
3,829,063	+				+0.2
3,829,064	-				-1.4
3,829,064	-				-1.0
3,829,064	-				-0.3
3,829,118	-				+0.1
3,829,122	+				+0.6
3,829,122	+				+0.6
3,829,123	-				+0.5
3,829,123	-				+0.9
3,829,123	-				+0.8