Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15680

Experiment: methylglyoxal 0.016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.016 vol%
3,547,777	-		AO356_15670	0.87	-0.6
3,547,777	-		AO356_15670	0.87	+2.0
3,547,881	+				+0.5
3,547,882	-				-0.1
3,547,882	-				+1.2
3,547,882	-				-0.4
3,547,899	+				-0.6
3,547,900	-				-1.2
3,547,900	-				-0.3
3,548,132	+				+1.1
3,548,132	+				-1.6
3,548,132	+				+0.2
3,548,133	-				+1.0
3,548,173	+				+0.4
3,548,174	-				-0.1
3,548,174	-				-2.4
3,548,192	-		AO356_15675	0.12	-0.7
3,548,232	+		AO356_15675	0.19	-0.4
3,548,232	+		AO356_15675	0.19	+0.1
3,548,235	+		AO356_15675	0.20	-0.5
3,548,235	+		AO356_15675	0.20	+1.0
3,548,235	+		AO356_15675	0.20	-0.1
3,548,236	-		AO356_15675	0.20	-0.0
3,548,282	+		AO356_15675	0.28	-0.7
3,548,282	+		AO356_15675	0.28	-1.0
3,548,283	-		AO356_15675	0.28	-0.5
3,548,283	-		AO356_15675	0.28	+1.6
3,548,283	-		AO356_15675	0.28	+1.5
3,548,325	+		AO356_15675	0.36	+0.3
3,548,326	-		AO356_15675	0.36	-0.4
3,548,349	+		AO356_15675	0.40	-0.1
3,548,350	-		AO356_15675	0.41	-0.2
3,548,350	-		AO356_15675	0.41	-0.6
3,548,350	-		AO356_15675	0.41	+1.0
3,548,427	-		AO356_15675	0.55	+1.1
3,548,538	+		AO356_15675	0.75	-0.3
3,548,538	+		AO356_15675	0.75	+0.5
3,548,538	+		AO356_15675	0.75	+0.8
3,548,538	+		AO356_15675	0.75	+1.2
3,548,538	+		AO356_15675	0.75	+1.2
3,548,539	-		AO356_15675	0.75	+0.3
3,548,539	-		AO356_15675	0.75	+1.1
3,548,539	-		AO356_15675	0.75	-1.2
3,548,539	-		AO356_15675	0.75	+0.3
3,548,539	-		AO356_15675	0.75	+0.4
3,548,539	-		AO356_15675	0.75	-0.3
3,548,539	-		AO356_15675	0.75	-1.0
3,548,689	+				+0.2
3,548,739	+				-1.7
3,548,739	+				-1.8
3,548,739	+				-2.2
3,548,739	+				-1.6
3,548,739	+				-1.9
3,548,739	+				-3.6
3,548,739	+				-3.1
3,548,740	-				-2.6
3,548,740	-				-2.6
3,548,740	-				-1.9
3,548,740	-				-2.2
3,548,740	-				-0.9
3,548,740	-				-2.9
3,548,740	-				-0.6
3,549,084	+		AO356_15680	0.27	-3.6
3,549,084	+		AO356_15680	0.27	-3.0
3,549,084	+		AO356_15680	0.27	-3.3
3,549,085	-		AO356_15680	0.27	-4.2
3,549,085	-		AO356_15680	0.27	-3.9
3,549,085	-		AO356_15680	0.27	-2.6
3,549,429	+		AO356_15680	0.52	-3.2
3,549,808	+		AO356_15680	0.80	-3.5
3,549,808	+		AO356_15680	0.80	-1.9
3,549,809	-		AO356_15680	0.80	-3.2
3,549,809	-		AO356_15680	0.80	-0.7
3,550,011	+				-2.9
3,550,084	-				+0.4
3,550,109	+				-1.4
3,550,109	+				+1.2
3,550,109	+				+0.5
3,550,109	+				-1.6
3,550,109	+				+0.2
3,550,109	+				-0.4
3,550,110	-				-0.1
3,550,110	-				+1.0
3,550,110	-				-0.0
3,550,110	-				+1.2
3,550,110	-				+1.0
3,550,110	-				+0.1
3,550,110	-				-0.8
3,550,110	-				+0.7
3,550,110	-				-0.4
3,550,110	-				-0.5
3,550,110	-				+0.8
3,550,287	+		AO356_15685	0.18	-0.8
3,550,325	+		AO356_15685	0.28	-1.0
3,550,325	+		AO356_15685	0.28	+0.3
3,550,511	+		AO356_15685	0.80	+0.4
3,550,511	+		AO356_15685	0.80	+1.6
3,550,511	+		AO356_15685	0.80	-0.4
3,550,511	+		AO356_15685	0.80	-1.6
3,550,511	+		AO356_15685	0.80	-0.4
3,550,511	+		AO356_15685	0.80	-0.9
3,550,512	-		AO356_15685	0.81	-0.1
3,550,512	-		AO356_15685	0.81	-0.4
3,550,512	-		AO356_15685	0.81	+1.1
3,550,512	-		AO356_15685	0.81	-0.5
3,550,512	-		AO356_15685	0.81	+1.1
3,550,512	-		AO356_15685	0.81	-0.1
3,550,513	+		AO356_15685	0.81	-0.4
3,550,513	+		AO356_15685	0.81	+0.6
3,550,513	+		AO356_15685	0.81	-0.3
3,550,513	+		AO356_15685	0.81	+1.1
3,550,513	+		AO356_15685	0.81	+1.1
3,550,513	+		AO356_15685	0.81	+0.5
3,550,513	+		AO356_15685	0.81	+0.5
3,550,514	-		AO356_15685	0.81	+1.5
3,550,514	-		AO356_15685	0.81	-0.5
3,550,514	-		AO356_15685	0.81	+1.9
3,550,514	-		AO356_15685	0.81	+0.6
3,550,514	-		AO356_15685	0.81	+0.5
3,550,514	-		AO356_15685	0.81	+0.8
3,550,558	-				+0.3
3,550,558	-				-0.4
3,550,558	-				-1.7
3,550,558	-				-0.4
3,550,609	+				-1.1
3,550,609	+				+1.4
3,550,609	+				-0.1
3,550,609	+				+1.4
3,550,610	-				-0.8
3,550,610	-				+0.1
3,550,610	-				-2.3
3,550,610	-				-1.8
3,550,610	-				+0.1
3,550,610	-				+0.4
3,550,611	+				+0.6
3,550,611	+				-0.7
3,550,611	+				+0.2
3,550,611	+				+1.0
3,550,612	-				+0.3
3,550,612	-				+2.3
3,550,612	-				-1.0
3,550,667	+				-2.3
3,550,706	-				-1.4
3,550,706	-				+0.3
3,550,732	+				-0.0
3,550,734	+				-1.8
3,550,735	-				+0.6
3,550,735	-				+0.5
3,550,750	+				+1.8
3,550,750	+				-0.9
3,550,750	+				+0.8
3,550,751	-				-0.4
3,550,751	-				+0.5
3,550,751	-				+0.5
3,550,751	-				-0.1
3,550,753	+				-1.8
3,550,753	+				-0.7
3,550,753	+				-0.1
3,550,794	+				+0.7
3,550,795	-				+1.5