Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12925 and AO356_12930 are separated by 121 nucleotides AO356_12930 and AO356_12935 are separated by 241 nucleotides AO356_12935 and AO356_12940 are separated by 124 nucleotides
AO356_12925: AO356_12925 - GntR family transcriptional regulator, at 2,942,275 to 2,942,982
_12925
AO356_12930: AO356_12930 - thioredoxin, at 2,943,104 to 2,943,433
_12930
AO356_12935: AO356_12935 - transcription termination factor Rho, at 2,943,675 to 2,944,934
_12935
AO356_12940: AO356_12940 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 2,945,059 to 2,946,525
_12940
Position (kb)
2943
2944
2945 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2942.813 kb on + strand, within AO356_12925 at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.927 kb on + strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.928 kb on - strand at 2942.931 kb on + strand at 2942.931 kb on + strand at 2942.931 kb on + strand at 2942.931 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.000 kb on + strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.001 kb on - strand at 2943.014 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.431 kb on + strand at 2943.432 kb on - strand at 2943.432 kb on - strand at 2943.432 kb on - strand at 2943.432 kb on - strand at 2943.432 kb on - strand at 2943.432 kb on - strand at 2943.515 kb on + strand at 2943.515 kb on + strand at 2943.582 kb on + strand at 2943.586 kb on + strand at 2943.586 kb on + strand at 2943.586 kb on + strand at 2943.624 kb on + strand at 2943.637 kb on + strand at 2943.637 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.653 kb on + strand at 2943.661 kb on + strand at 2943.661 kb on + strand at 2943.661 kb on + strand at 2943.672 kb on + strand at 2943.672 kb on + strand at 2944.932 kb on + strand at 2944.932 kb on + strand at 2944.933 kb on - strand at 2944.933 kb on - strand at 2944.933 kb on - strand at 2944.933 kb on - strand at 2944.933 kb on - strand at 2944.981 kb on + strand at 2944.996 kb on + strand at 2944.997 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,942,813 + AO356_12925 0.76 -0.5 2,942,927 + +0.6 2,942,927 + +1.7 2,942,927 + -2.3 2,942,927 + -0.8 2,942,927 + +0.5 2,942,927 + +0.8 2,942,927 + +0.5 2,942,927 + -0.8 2,942,927 + +0.6 2,942,927 + -0.5 2,942,927 + -0.4 2,942,927 + +0.2 2,942,927 + +0.7 2,942,927 + +0.4 2,942,927 + +0.1 2,942,927 + -0.5 2,942,927 + +0.7 2,942,927 + +0.5 2,942,927 + -0.4 2,942,927 + +1.0 2,942,927 + -0.1 2,942,927 + +0.4 2,942,927 + +0.7 2,942,927 + -0.9 2,942,927 + +0.6 2,942,927 + +1.7 2,942,928 - +0.4 2,942,928 - -1.4 2,942,928 - +0.8 2,942,928 - -0.5 2,942,928 - -0.8 2,942,928 - +0.1 2,942,928 - +0.8 2,942,928 - +0.8 2,942,928 - +1.3 2,942,928 - +1.3 2,942,928 - +0.1 2,942,928 - +0.6 2,942,928 - +0.3 2,942,931 + +0.2 2,942,931 + -1.9 2,942,931 + +0.7 2,942,931 + +0.6 2,943,000 + +0.8 2,943,000 + +0.1 2,943,000 + -0.5 2,943,000 + -1.0 2,943,000 + -0.9 2,943,000 + -1.0 2,943,000 + +0.9 2,943,000 + +0.0 2,943,000 + +0.8 2,943,001 - -0.4 2,943,001 - +0.9 2,943,001 - +0.1 2,943,001 - +0.1 2,943,001 - -0.5 2,943,001 - +0.3 2,943,001 - +0.7 2,943,001 - +0.8 2,943,001 - +0.1 2,943,001 - +0.1 2,943,001 - +0.5 2,943,001 - +0.7 2,943,001 - +1.0 2,943,001 - +1.1 2,943,014 + -1.4 2,943,431 + -1.9 2,943,431 + +0.6 2,943,431 + -0.2 2,943,431 + -1.8 2,943,431 + +0.3 2,943,431 + +0.4 2,943,431 + -1.8 2,943,431 + +0.7 2,943,432 - -0.4 2,943,432 - +0.0 2,943,432 - -0.5 2,943,432 - +0.9 2,943,432 - +2.4 2,943,432 - +1.4 2,943,515 + -0.3 2,943,515 + -2.9 2,943,582 + +0.1 2,943,586 + -0.5 2,943,586 + +0.9 2,943,586 + -0.2 2,943,624 + -1.0 2,943,637 + -0.8 2,943,637 + -0.6 2,943,653 + -2.7 2,943,653 + -0.4 2,943,653 + -0.2 2,943,653 + +0.0 2,943,653 + -0.8 2,943,653 + +0.5 2,943,653 + -0.9 2,943,653 + -0.7 2,943,653 + -0.2 2,943,661 + -1.1 2,943,661 + +0.4 2,943,661 + -0.4 2,943,672 + -0.4 2,943,672 + +0.2 2,944,932 + -0.2 2,944,932 + +0.6 2,944,933 - -0.8 2,944,933 - +0.5 2,944,933 - +0.3 2,944,933 - -1.4 2,944,933 - +1.8 2,944,981 + -0.0 2,944,996 + -2.1 2,944,997 - +2.9
Or see this region's nucleotide sequence