Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11750 and AO356_11755 are separated by 3 nucleotides AO356_11755 and AO356_11760 overlap by 11 nucleotides AO356_11760 and AO356_11765 are separated by 182 nucleotides
AO356_11750: AO356_11750 - toxin HipA, at 2,661,077 to 2,662,333
_11750
AO356_11755: AO356_11755 - ADP-ribose pyrophosphatase, at 2,662,337 to 2,663,044
_11755
AO356_11760: AO356_11760 - cytidyltransferase, at 2,663,034 to 2,663,591
_11760
AO356_11765: AO356_11765 - amidase, at 2,663,774 to 2,664,421
_11765
Position (kb)
2662
2663
2664 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2661.369 kb on + strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.402 kb on - strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.645 kb on + strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.646 kb on - strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.648 kb on + strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.649 kb on - strand, within AO356_11750 at 2661.688 kb on + strand, within AO356_11750 at 2661.688 kb on + strand, within AO356_11750 at 2661.689 kb on - strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.691 kb on + strand, within AO356_11750 at 2661.692 kb on - strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.758 kb on + strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.759 kb on - strand, within AO356_11750 at 2661.786 kb on - strand, within AO356_11750 at 2661.786 kb on - strand, within AO356_11750 at 2661.797 kb on + strand, within AO356_11750 at 2661.797 kb on + strand, within AO356_11750 at 2661.798 kb on - strand, within AO356_11750 at 2661.815 kb on - strand, within AO356_11750 at 2661.815 kb on - strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.917 kb on + strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.918 kb on - strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.936 kb on + strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2661.937 kb on - strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.032 kb on + strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.033 kb on - strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.050 kb on + strand, within AO356_11750 at 2662.051 kb on - strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.088 kb on + strand, within AO356_11750 at 2662.089 kb on - strand, within AO356_11750 at 2662.089 kb on - strand, within AO356_11750 at 2662.089 kb on - strand, within AO356_11750 at 2662.155 kb on + strand, within AO356_11750 at 2662.155 kb on + strand, within AO356_11750 at 2662.155 kb on + strand, within AO356_11750 at 2662.155 kb on + strand, within AO356_11750 at 2662.156 kb on - strand, within AO356_11750 at 2662.156 kb on - strand, within AO356_11750 at 2662.156 kb on - strand, within AO356_11750 at 2662.156 kb on - strand, within AO356_11750 at 2662.156 kb on - strand, within AO356_11750 at 2662.271 kb on + strand at 2662.338 kb on + strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2662.339 kb on - strand at 2663.014 kb on - strand at 2663.036 kb on - strand at 2663.061 kb on - strand at 2663.066 kb on - strand at 2663.074 kb on + strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.079 kb on + strand at 2663.221 kb on + strand, within AO356_11760 at 2663.222 kb on - strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,661,369 + AO356_11750 0.23 +0.5 2,661,402 - AO356_11750 0.26 +0.5 2,661,402 - AO356_11750 0.26 -0.5 2,661,402 - AO356_11750 0.26 +0.4 2,661,402 - AO356_11750 0.26 +0.6 2,661,402 - AO356_11750 0.26 +1.2 2,661,402 - AO356_11750 0.26 +1.2 2,661,402 - AO356_11750 0.26 -0.6 2,661,645 + AO356_11750 0.45 -0.4 2,661,645 + AO356_11750 0.45 -1.2 2,661,645 + AO356_11750 0.45 +0.6 2,661,645 + AO356_11750 0.45 -0.6 2,661,645 + AO356_11750 0.45 -2.5 2,661,645 + AO356_11750 0.45 -0.2 2,661,646 - AO356_11750 0.45 +0.4 2,661,646 - AO356_11750 0.45 -0.5 2,661,646 - AO356_11750 0.45 -1.3 2,661,646 - AO356_11750 0.45 -0.8 2,661,646 - AO356_11750 0.45 -2.2 2,661,646 - AO356_11750 0.45 -0.8 2,661,646 - AO356_11750 0.45 -0.3 2,661,648 + AO356_11750 0.45 -1.3 2,661,648 + AO356_11750 0.45 -0.8 2,661,648 + AO356_11750 0.45 +0.4 2,661,648 + AO356_11750 0.45 -0.6 2,661,648 + AO356_11750 0.45 +0.8 2,661,648 + AO356_11750 0.45 +1.8 2,661,648 + AO356_11750 0.45 +2.2 2,661,648 + AO356_11750 0.45 +1.5 2,661,648 + AO356_11750 0.45 +0.3 2,661,648 + AO356_11750 0.45 -0.2 2,661,648 + AO356_11750 0.45 +0.6 2,661,648 + AO356_11750 0.45 +0.9 2,661,648 + AO356_11750 0.45 +0.0 2,661,648 + AO356_11750 0.45 +0.3 2,661,649 - AO356_11750 0.46 -1.8 2,661,649 - AO356_11750 0.46 -0.1 2,661,649 - AO356_11750 0.46 +0.4 2,661,649 - AO356_11750 0.46 +1.1 2,661,649 - AO356_11750 0.46 +0.2 2,661,649 - AO356_11750 0.46 +0.3 2,661,649 - AO356_11750 0.46 -1.8 2,661,649 - AO356_11750 0.46 -2.2 2,661,649 - AO356_11750 0.46 -0.8 2,661,649 - AO356_11750 0.46 -1.2 2,661,649 - AO356_11750 0.46 +0.4 2,661,649 - AO356_11750 0.46 -1.2 2,661,649 - AO356_11750 0.46 +0.3 2,661,649 - AO356_11750 0.46 +0.1 2,661,649 - AO356_11750 0.46 +0.7 2,661,649 - AO356_11750 0.46 +1.6 2,661,649 - AO356_11750 0.46 +0.8 2,661,688 + AO356_11750 0.49 -0.7 2,661,688 + AO356_11750 0.49 -0.4 2,661,689 - AO356_11750 0.49 +1.5 2,661,691 + AO356_11750 0.49 +0.8 2,661,691 + AO356_11750 0.49 +1.7 2,661,691 + AO356_11750 0.49 +1.2 2,661,691 + AO356_11750 0.49 +0.4 2,661,692 - AO356_11750 0.49 +0.7 2,661,758 + AO356_11750 0.54 +0.5 2,661,758 + AO356_11750 0.54 +1.6 2,661,758 + AO356_11750 0.54 +0.9 2,661,758 + AO356_11750 0.54 +0.2 2,661,758 + AO356_11750 0.54 +1.7 2,661,758 + AO356_11750 0.54 +0.2 2,661,758 + AO356_11750 0.54 +1.6 2,661,759 - AO356_11750 0.54 +0.7 2,661,759 - AO356_11750 0.54 +1.4 2,661,759 - AO356_11750 0.54 +0.8 2,661,759 - AO356_11750 0.54 -1.2 2,661,759 - AO356_11750 0.54 -0.6 2,661,759 - AO356_11750 0.54 +0.4 2,661,786 - AO356_11750 0.56 +0.5 2,661,786 - AO356_11750 0.56 +0.6 2,661,797 + AO356_11750 0.57 +1.2 2,661,797 + AO356_11750 0.57 +0.1 2,661,798 - AO356_11750 0.57 +0.5 2,661,815 - AO356_11750 0.59 -0.4 2,661,815 - AO356_11750 0.59 -2.1 2,661,917 + AO356_11750 0.67 +2.4 2,661,917 + AO356_11750 0.67 +1.3 2,661,917 + AO356_11750 0.67 -0.6 2,661,917 + AO356_11750 0.67 +1.1 2,661,917 + AO356_11750 0.67 +0.6 2,661,918 - AO356_11750 0.67 +0.7 2,661,918 - AO356_11750 0.67 -0.3 2,661,918 - AO356_11750 0.67 +0.7 2,661,918 - AO356_11750 0.67 +0.7 2,661,936 + AO356_11750 0.68 -1.0 2,661,936 + AO356_11750 0.68 +0.4 2,661,936 + AO356_11750 0.68 -1.5 2,661,936 + AO356_11750 0.68 +1.0 2,661,936 + AO356_11750 0.68 +0.9 2,661,937 - AO356_11750 0.68 +0.6 2,661,937 - AO356_11750 0.68 -0.4 2,661,937 - AO356_11750 0.68 -1.3 2,661,937 - AO356_11750 0.68 +1.4 2,661,937 - AO356_11750 0.68 +0.6 2,661,937 - AO356_11750 0.68 +1.6 2,661,937 - AO356_11750 0.68 -2.8 2,662,032 + AO356_11750 0.76 +0.5 2,662,032 + AO356_11750 0.76 +0.7 2,662,032 + AO356_11750 0.76 +1.2 2,662,032 + AO356_11750 0.76 +1.1 2,662,033 - AO356_11750 0.76 -1.0 2,662,033 - AO356_11750 0.76 -1.7 2,662,033 - AO356_11750 0.76 +1.6 2,662,050 + AO356_11750 0.77 -1.4 2,662,050 + AO356_11750 0.77 +2.0 2,662,050 + AO356_11750 0.77 +0.6 2,662,051 - AO356_11750 0.77 +0.5 2,662,088 + AO356_11750 0.80 +0.4 2,662,088 + AO356_11750 0.80 -0.2 2,662,088 + AO356_11750 0.80 +2.2 2,662,088 + AO356_11750 0.80 +1.2 2,662,088 + AO356_11750 0.80 -0.6 2,662,088 + AO356_11750 0.80 +0.7 2,662,089 - AO356_11750 0.81 +1.2 2,662,089 - AO356_11750 0.81 +0.3 2,662,089 - AO356_11750 0.81 -0.2 2,662,155 + AO356_11750 0.86 -1.0 2,662,155 + AO356_11750 0.86 -0.0 2,662,155 + AO356_11750 0.86 +1.0 2,662,155 + AO356_11750 0.86 +0.8 2,662,156 - AO356_11750 0.86 +0.1 2,662,156 - AO356_11750 0.86 -0.7 2,662,156 - AO356_11750 0.86 +1.0 2,662,156 - AO356_11750 0.86 +1.5 2,662,156 - AO356_11750 0.86 +0.1 2,662,271 + +0.6 2,662,338 + +0.9 2,662,339 - +0.6 2,662,339 - +0.4 2,662,339 - -1.2 2,662,339 - +0.2 2,662,339 - -0.2 2,662,339 - -3.1 2,662,339 - +1.6 2,663,014 - -0.3 2,663,036 - -0.1 2,663,061 - -1.6 2,663,066 - +0.2 2,663,074 + +1.8 2,663,075 - +0.1 2,663,075 - -0.4 2,663,075 - -1.3 2,663,075 - -1.0 2,663,075 - -2.9 2,663,079 + +1.8 2,663,221 + AO356_11760 0.34 +0.5 2,663,222 - AO356_11760 0.34 -0.6 2,663,320 + AO356_11760 0.51 +1.2 2,663,320 + AO356_11760 0.51 +2.3 2,663,320 + AO356_11760 0.51 +1.6 2,663,320 + AO356_11760 0.51 +2.1 2,663,320 + AO356_11760 0.51 +1.8 2,663,320 + AO356_11760 0.51 +3.4 2,663,320 + AO356_11760 0.51 +2.9 2,663,321 - AO356_11760 0.51 -2.6 2,663,321 - AO356_11760 0.51 -3.2 2,663,321 - AO356_11760 0.51 +0.1 2,663,321 - AO356_11760 0.51 +0.0 2,663,321 - AO356_11760 0.51 -0.1 2,663,321 - AO356_11760 0.51 -0.4 2,663,321 - AO356_11760 0.51 +0.1 2,663,321 - AO356_11760 0.51 +0.1 2,663,321 - AO356_11760 0.51 +0.0 2,663,321 - AO356_11760 0.51 -0.9 2,663,326 + AO356_11760 0.52 +3.3 2,663,326 + AO356_11760 0.52 +2.3 2,663,326 + AO356_11760 0.52 +1.9 2,663,326 + AO356_11760 0.52 +2.2 2,663,326 + AO356_11760 0.52 +2.2 2,663,326 + AO356_11760 0.52 +1.0 2,663,327 - AO356_11760 0.53 -0.3 2,663,327 - AO356_11760 0.53 +0.2 2,663,327 - AO356_11760 0.53 -0.9 2,663,327 - AO356_11760 0.53 -1.9 2,663,327 - AO356_11760 0.53 -1.6 2,663,327 - AO356_11760 0.53 -2.5 2,663,327 - AO356_11760 0.53 +0.6 2,663,446 + AO356_11760 0.74 +3.7 2,663,446 + AO356_11760 0.74 +2.1 2,663,446 + AO356_11760 0.74 +2.8 2,663,446 + AO356_11760 0.74 +2.7 2,663,447 - AO356_11760 0.74 -0.8 2,663,447 - AO356_11760 0.74 -1.2 2,663,447 - AO356_11760 0.74 -1.1 2,663,447 - AO356_11760 0.74 -0.3 2,663,447 - AO356_11760 0.74 +0.4 2,663,447 - AO356_11760 0.74 -0.2 2,663,447 - AO356_11760 0.74 -0.4 2,663,447 - AO356_11760 0.74 -0.8
Or see this region's nucleotide sequence