Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11630 and AO356_11635 are separated by 5 nucleotides AO356_11635 and AO356_11640 are separated by 20 nucleotides
AO356_11630: AO356_11630 - DNA gyrase subunit B, at 2,633,225 to 2,635,642
_11630
AO356_11635: AO356_11635 - recombinase RecF, at 2,635,648 to 2,636,751
_11635
AO356_11640: AO356_11640 - DNA polymerase III subunit beta, at 2,636,772 to 2,637,875
_11640
Position (kb)
2635
2636
2637 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2635.739 kb on - strand at 2635.751 kb on - strand at 2635.751 kb on - strand at 2635.751 kb on - strand at 2635.751 kb on - strand at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.778 kb on - strand, within AO356_11635 at 2635.851 kb on - strand, within AO356_11635 at 2635.851 kb on - strand, within AO356_11635 at 2635.851 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.855 kb on - strand, within AO356_11635 at 2635.919 kb on - strand, within AO356_11635 at 2635.919 kb on - strand, within AO356_11635 at 2635.919 kb on - strand, within AO356_11635 at 2635.919 kb on - strand, within AO356_11635 at 2635.919 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2635.957 kb on - strand, within AO356_11635 at 2636.085 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.088 kb on - strand, within AO356_11635 at 2636.163 kb on - strand, within AO356_11635 at 2636.163 kb on - strand, within AO356_11635 at 2636.163 kb on - strand, within AO356_11635 at 2636.175 kb on - strand, within AO356_11635 at 2636.175 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.245 kb on - strand, within AO356_11635 at 2636.509 kb on - strand, within AO356_11635 at 2636.564 kb on + strand, within AO356_11635 at 2636.666 kb on + strand at 2636.667 kb on - strand at 2636.673 kb on + strand at 2636.674 kb on - strand at 2636.674 kb on - strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.743 kb on + strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.744 kb on - strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.753 kb on + strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.754 kb on - strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.773 kb on + strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand at 2636.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,635,739 - -1.7 2,635,751 - -1.1 2,635,751 - -2.5 2,635,751 - -1.7 2,635,751 - -2.3 2,635,778 - AO356_11635 0.12 -1.3 2,635,778 - AO356_11635 0.12 -1.7 2,635,778 - AO356_11635 0.12 -1.3 2,635,778 - AO356_11635 0.12 -2.3 2,635,778 - AO356_11635 0.12 -1.5 2,635,778 - AO356_11635 0.12 -1.7 2,635,778 - AO356_11635 0.12 -0.6 2,635,778 - AO356_11635 0.12 -2.6 2,635,778 - AO356_11635 0.12 -1.4 2,635,851 - AO356_11635 0.18 -1.3 2,635,851 - AO356_11635 0.18 -0.7 2,635,851 - AO356_11635 0.18 -1.1 2,635,855 - AO356_11635 0.19 -1.6 2,635,855 - AO356_11635 0.19 -0.6 2,635,855 - AO356_11635 0.19 -2.8 2,635,855 - AO356_11635 0.19 -2.3 2,635,855 - AO356_11635 0.19 -1.7 2,635,855 - AO356_11635 0.19 +0.6 2,635,855 - AO356_11635 0.19 -1.8 2,635,855 - AO356_11635 0.19 -2.2 2,635,919 - AO356_11635 0.25 -0.8 2,635,919 - AO356_11635 0.25 -1.5 2,635,919 - AO356_11635 0.25 -2.8 2,635,919 - AO356_11635 0.25 -2.2 2,635,919 - AO356_11635 0.25 -0.5 2,635,957 - AO356_11635 0.28 -1.2 2,635,957 - AO356_11635 0.28 +0.3 2,635,957 - AO356_11635 0.28 -0.5 2,635,957 - AO356_11635 0.28 -1.7 2,635,957 - AO356_11635 0.28 -2.1 2,635,957 - AO356_11635 0.28 -0.6 2,636,085 - AO356_11635 0.40 -2.2 2,636,088 - AO356_11635 0.40 -4.2 2,636,088 - AO356_11635 0.40 -2.3 2,636,088 - AO356_11635 0.40 -0.7 2,636,088 - AO356_11635 0.40 -1.5 2,636,088 - AO356_11635 0.40 -3.1 2,636,088 - AO356_11635 0.40 +1.1 2,636,088 - AO356_11635 0.40 -2.1 2,636,163 - AO356_11635 0.47 +0.0 2,636,163 - AO356_11635 0.47 -1.8 2,636,163 - AO356_11635 0.47 -0.6 2,636,175 - AO356_11635 0.48 -0.1 2,636,175 - AO356_11635 0.48 -2.4 2,636,245 - AO356_11635 0.54 -1.8 2,636,245 - AO356_11635 0.54 -2.2 2,636,245 - AO356_11635 0.54 +0.0 2,636,245 - AO356_11635 0.54 -1.2 2,636,245 - AO356_11635 0.54 -0.7 2,636,245 - AO356_11635 0.54 -2.0 2,636,245 - AO356_11635 0.54 -0.5 2,636,509 - AO356_11635 0.78 -2.8 2,636,564 + AO356_11635 0.83 -2.3 2,636,666 + -1.9 2,636,667 - -2.0 2,636,673 + -2.4 2,636,674 - -1.6 2,636,674 - -3.1 2,636,743 + -1.0 2,636,743 + -1.9 2,636,743 + -1.7 2,636,743 + -0.4 2,636,743 + -3.3 2,636,743 + -1.2 2,636,743 + -0.0 2,636,744 - -2.3 2,636,744 - -1.7 2,636,744 - -1.8 2,636,744 - -0.8 2,636,744 - -1.0 2,636,744 - -0.8 2,636,744 - +0.2 2,636,744 - -4.4 2,636,753 + -2.2 2,636,753 + -3.0 2,636,753 + -1.5 2,636,753 + -1.0 2,636,753 + -1.2 2,636,753 + -0.1 2,636,753 + -0.4 2,636,753 + -2.6 2,636,753 + -1.6 2,636,753 + -1.5 2,636,753 + +0.1 2,636,753 + +0.2 2,636,754 - -1.1 2,636,754 - +0.7 2,636,754 - -0.6 2,636,754 - -1.2 2,636,754 - +0.7 2,636,754 - -0.7 2,636,754 - -0.0 2,636,754 - +0.9 2,636,773 + -0.6 2,636,773 + -1.6 2,636,773 + -2.8 2,636,773 + -2.2 2,636,773 + -0.7 2,636,773 + -0.5 2,636,773 + -1.9 2,636,774 - +0.3 2,636,774 - -0.7 2,636,774 - +1.8 2,636,774 - -0.8 2,636,774 - -1.3 2,636,774 - +1.9 2,636,774 - +0.5 2,636,774 - -0.1
Or see this region's nucleotide sequence