Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10875 and AO356_10880 are separated by 319 nucleotides AO356_10880 and AO356_10885 are separated by 1 nucleotides AO356_10885 and AO356_10890 are separated by 57 nucleotides AO356_10890 and AO356_10895 are separated by 106 nucleotides
AO356_10875: AO356_10875 - acetyl-CoA hydrolase, at 2,479,542 to 2,481,035
_10875
AO356_10880: AO356_10880 - hypothetical protein, at 2,481,355 to 2,481,570
_10880
AO356_10885: AO356_10885 - hypothetical protein, at 2,481,572 to 2,481,835
_10885
AO356_10890: AO356_10890 - holliday junction resolvasome, helicase subunit, at 2,481,893 to 2,482,210
_10890
AO356_10895: AO356_10895 - Holliday junction resolvase, at 2,482,317 to 2,482,625
_10895
Position (kb)
2481
2482 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.397 kb on + strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.398 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.493 kb on - strand, within AO356_10875 at 2480.523 kb on + strand, within AO356_10875 at 2480.523 kb on + strand, within AO356_10875 at 2480.523 kb on + strand, within AO356_10875 at 2480.523 kb on + strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.524 kb on - strand, within AO356_10875 at 2480.600 kb on + strand, within AO356_10875 at 2480.600 kb on + strand, within AO356_10875 at 2480.600 kb on + strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.601 kb on - strand, within AO356_10875 at 2480.628 kb on + strand, within AO356_10875 at 2480.628 kb on + strand, within AO356_10875 at 2480.628 kb on + strand, within AO356_10875 at 2480.628 kb on + strand, within AO356_10875 at 2480.629 kb on - strand, within AO356_10875 at 2480.629 kb on - strand, within AO356_10875 at 2480.629 kb on - strand, within AO356_10875 at 2480.629 kb on - strand, within AO356_10875 at 2480.907 kb on + strand at 2480.907 kb on + strand at 2480.907 kb on + strand at 2480.907 kb on + strand at 2480.907 kb on + strand at 2480.907 kb on + strand at 2480.908 kb on - strand at 2480.908 kb on - strand at 2480.928 kb on + strand at 2480.928 kb on + strand at 2480.928 kb on + strand at 2480.929 kb on - strand at 2480.960 kb on + strand at 2480.960 kb on + strand at 2480.960 kb on + strand at 2480.960 kb on + strand at 2480.961 kb on - strand at 2480.961 kb on - strand at 2480.969 kb on + strand at 2481.036 kb on + strand at 2481.062 kb on + strand at 2481.062 kb on + strand at 2481.063 kb on - strand at 2481.063 kb on - strand at 2481.197 kb on - strand at 2481.221 kb on - strand at 2481.257 kb on - strand at 2481.269 kb on + strand at 2481.273 kb on + strand at 2481.320 kb on + strand at 2481.320 kb on + strand at 2481.321 kb on - strand at 2481.321 kb on - strand at 2481.321 kb on - strand at 2481.325 kb on - strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.363 kb on + strand at 2481.364 kb on - strand at 2481.364 kb on - strand at 2481.364 kb on - strand at 2481.364 kb on - strand at 2481.364 kb on - strand at 2481.538 kb on + strand, within AO356_10880 at 2481.701 kb on + strand, within AO356_10885 at 2481.702 kb on - strand, within AO356_10885 at 2481.702 kb on - strand, within AO356_10885 at 2481.702 kb on - strand, within AO356_10885 at 2481.709 kb on + strand, within AO356_10885 at 2481.709 kb on + strand, within AO356_10885 at 2481.719 kb on - strand, within AO356_10885 at 2481.719 kb on - strand, within AO356_10885 at 2481.719 kb on - strand, within AO356_10885 at 2481.719 kb on - strand, within AO356_10885 at 2481.720 kb on + strand, within AO356_10885 at 2481.720 kb on + strand, within AO356_10885 at 2481.720 kb on + strand, within AO356_10885 at 2481.721 kb on - strand, within AO356_10885 at 2481.733 kb on + strand, within AO356_10885 at 2481.734 kb on - strand, within AO356_10885 at 2481.738 kb on + strand, within AO356_10885 at 2481.739 kb on - strand, within AO356_10885 at 2481.739 kb on - strand, within AO356_10885 at 2481.739 kb on - strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.799 kb on + strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.800 kb on - strand, within AO356_10885 at 2481.803 kb on - strand, within AO356_10885 at 2481.803 kb on - strand, within AO356_10885 at 2481.853 kb on + strand at 2481.853 kb on + strand at 2482.139 kb on + strand, within AO356_10890 at 2482.139 kb on + strand, within AO356_10890 at 2482.139 kb on + strand, within AO356_10890 at 2482.139 kb on + strand, within AO356_10890 at 2482.140 kb on - strand, within AO356_10890 at 2482.140 kb on - strand, within AO356_10890 at 2482.326 kb on + strand at 2482.326 kb on + strand at 2482.327 kb on - strand at 2482.327 kb on - strand at 2482.463 kb on + strand, within AO356_10895 at 2482.463 kb on + strand, within AO356_10895 at 2482.463 kb on + strand, within AO356_10895 at 2482.463 kb on + strand, within AO356_10895 at 2482.463 kb on + strand, within AO356_10895 at 2482.464 kb on - strand, within AO356_10895 at 2482.554 kb on + strand, within AO356_10895 at 2482.554 kb on + strand, within AO356_10895 at 2482.555 kb on - strand, within AO356_10895 at 2482.555 kb on - strand, within AO356_10895
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,480,397 + AO356_10875 0.57 -0.4 2,480,397 + AO356_10875 0.57 +0.4 2,480,397 + AO356_10875 0.57 +1.2 2,480,397 + AO356_10875 0.57 +0.6 2,480,397 + AO356_10875 0.57 -0.1 2,480,397 + AO356_10875 0.57 +1.2 2,480,397 + AO356_10875 0.57 -1.9 2,480,397 + AO356_10875 0.57 +0.4 2,480,397 + AO356_10875 0.57 -0.4 2,480,397 + AO356_10875 0.57 -0.5 2,480,397 + AO356_10875 0.57 +0.9 2,480,397 + AO356_10875 0.57 -0.4 2,480,398 - AO356_10875 0.57 +0.2 2,480,398 - AO356_10875 0.57 -1.7 2,480,398 - AO356_10875 0.57 +1.8 2,480,398 - AO356_10875 0.57 -0.4 2,480,398 - AO356_10875 0.57 -0.9 2,480,398 - AO356_10875 0.57 +0.5 2,480,398 - AO356_10875 0.57 -0.8 2,480,398 - AO356_10875 0.57 -0.3 2,480,398 - AO356_10875 0.57 -0.1 2,480,398 - AO356_10875 0.57 -1.3 2,480,398 - AO356_10875 0.57 +0.7 2,480,398 - AO356_10875 0.57 +0.8 2,480,398 - AO356_10875 0.57 -0.9 2,480,398 - AO356_10875 0.57 +0.6 2,480,398 - AO356_10875 0.57 -0.7 2,480,493 - AO356_10875 0.64 -1.8 2,480,493 - AO356_10875 0.64 -0.7 2,480,493 - AO356_10875 0.64 +0.0 2,480,493 - AO356_10875 0.64 +0.9 2,480,493 - AO356_10875 0.64 +0.2 2,480,493 - AO356_10875 0.64 +1.7 2,480,493 - AO356_10875 0.64 -0.3 2,480,523 + AO356_10875 0.66 +0.7 2,480,523 + AO356_10875 0.66 +0.1 2,480,523 + AO356_10875 0.66 +0.5 2,480,523 + AO356_10875 0.66 -2.8 2,480,524 - AO356_10875 0.66 +0.1 2,480,524 - AO356_10875 0.66 -0.5 2,480,524 - AO356_10875 0.66 -0.8 2,480,524 - AO356_10875 0.66 -2.8 2,480,524 - AO356_10875 0.66 +0.2 2,480,524 - AO356_10875 0.66 +1.0 2,480,524 - AO356_10875 0.66 +0.6 2,480,600 + AO356_10875 0.71 +1.4 2,480,600 + AO356_10875 0.71 -1.1 2,480,600 + AO356_10875 0.71 +0.6 2,480,601 - AO356_10875 0.71 -0.7 2,480,601 - AO356_10875 0.71 +1.2 2,480,601 - AO356_10875 0.71 -2.2 2,480,601 - AO356_10875 0.71 -0.5 2,480,601 - AO356_10875 0.71 -0.9 2,480,601 - AO356_10875 0.71 -0.4 2,480,628 + AO356_10875 0.73 -1.5 2,480,628 + AO356_10875 0.73 -0.7 2,480,628 + AO356_10875 0.73 +0.4 2,480,628 + AO356_10875 0.73 +0.5 2,480,629 - AO356_10875 0.73 -0.3 2,480,629 - AO356_10875 0.73 -0.7 2,480,629 - AO356_10875 0.73 +0.9 2,480,629 - AO356_10875 0.73 +0.1 2,480,907 + -0.2 2,480,907 + +0.8 2,480,907 + +1.1 2,480,907 + +0.8 2,480,907 + -0.4 2,480,907 + +0.7 2,480,908 - -1.3 2,480,908 - -1.0 2,480,928 + -1.6 2,480,928 + -2.2 2,480,928 + +1.4 2,480,929 - -0.3 2,480,960 + -1.9 2,480,960 + -1.2 2,480,960 + -1.0 2,480,960 + +0.3 2,480,961 - -1.4 2,480,961 - +0.6 2,480,969 + -0.8 2,481,036 + +0.4 2,481,062 + +0.7 2,481,062 + +0.5 2,481,063 - -1.0 2,481,063 - -0.1 2,481,197 - -1.5 2,481,221 - +0.5 2,481,257 - +0.5 2,481,269 + +0.5 2,481,273 + +0.6 2,481,320 + -0.9 2,481,320 + -1.3 2,481,321 - -2.3 2,481,321 - -0.6 2,481,321 - -0.4 2,481,325 - -0.1 2,481,363 + -1.9 2,481,363 + -0.2 2,481,363 + +0.3 2,481,363 + -0.7 2,481,363 + -1.7 2,481,363 + -2.4 2,481,363 + -0.5 2,481,363 + -2.3 2,481,363 + -0.4 2,481,363 + -0.2 2,481,363 + -1.5 2,481,363 + -0.8 2,481,363 + -0.6 2,481,364 - -0.3 2,481,364 - -0.5 2,481,364 - -0.7 2,481,364 - +0.1 2,481,364 - +0.3 2,481,538 + AO356_10880 0.85 -0.8 2,481,701 + AO356_10885 0.49 -1.1 2,481,702 - AO356_10885 0.49 +0.7 2,481,702 - AO356_10885 0.49 -0.3 2,481,702 - AO356_10885 0.49 +1.4 2,481,709 + AO356_10885 0.52 +1.2 2,481,709 + AO356_10885 0.52 -0.4 2,481,719 - AO356_10885 0.56 +1.2 2,481,719 - AO356_10885 0.56 -0.9 2,481,719 - AO356_10885 0.56 -0.3 2,481,719 - AO356_10885 0.56 +1.1 2,481,720 + AO356_10885 0.56 +0.0 2,481,720 + AO356_10885 0.56 +1.2 2,481,720 + AO356_10885 0.56 -0.1 2,481,721 - AO356_10885 0.56 -1.1 2,481,733 + AO356_10885 0.61 -0.6 2,481,734 - AO356_10885 0.61 +0.0 2,481,738 + AO356_10885 0.63 +1.1 2,481,739 - AO356_10885 0.63 +1.6 2,481,739 - AO356_10885 0.63 +0.6 2,481,739 - AO356_10885 0.63 +1.0 2,481,799 + AO356_10885 0.86 +0.5 2,481,799 + AO356_10885 0.86 +0.9 2,481,799 + AO356_10885 0.86 +0.8 2,481,799 + AO356_10885 0.86 +2.0 2,481,799 + AO356_10885 0.86 -0.6 2,481,799 + AO356_10885 0.86 +0.3 2,481,799 + AO356_10885 0.86 +0.6 2,481,800 - AO356_10885 0.86 -0.6 2,481,800 - AO356_10885 0.86 -2.4 2,481,800 - AO356_10885 0.86 -1.6 2,481,800 - AO356_10885 0.86 +0.5 2,481,800 - AO356_10885 0.86 -0.6 2,481,800 - AO356_10885 0.86 +0.9 2,481,800 - AO356_10885 0.86 -1.1 2,481,800 - AO356_10885 0.86 +0.7 2,481,803 - AO356_10885 0.88 -1.3 2,481,803 - AO356_10885 0.88 -0.2 2,481,853 + -0.6 2,481,853 + -1.2 2,482,139 + AO356_10890 0.77 +1.4 2,482,139 + AO356_10890 0.77 +0.0 2,482,139 + AO356_10890 0.77 +2.5 2,482,139 + AO356_10890 0.77 -0.2 2,482,140 - AO356_10890 0.78 -2.4 2,482,140 - AO356_10890 0.78 +0.5 2,482,326 + +1.9 2,482,326 + +0.3 2,482,327 - +0.9 2,482,327 - +0.8 2,482,463 + AO356_10895 0.47 +0.1 2,482,463 + AO356_10895 0.47 +0.2 2,482,463 + AO356_10895 0.47 -0.6 2,482,463 + AO356_10895 0.47 +1.4 2,482,463 + AO356_10895 0.47 +0.2 2,482,464 - AO356_10895 0.48 -2.4 2,482,554 + AO356_10895 0.77 -0.5 2,482,554 + AO356_10895 0.77 +0.4 2,482,555 - AO356_10895 0.77 +0.9 2,482,555 - AO356_10895 0.77 +0.8
Or see this region's nucleotide sequence