Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10185 and AO356_10190 are separated by 249 nucleotides AO356_10190 and AO356_10195 are separated by 20 nucleotides AO356_10195 and AO356_10200 overlap by 4 nucleotides
AO356_10185: AO356_10185 - glutamate--cysteine ligase, at 2,297,998 to 2,299,581
_10185
AO356_10190: AO356_10190 - taurine ABC transporter substrate-binding protein, at 2,299,831 to 2,300,808
_10190
AO356_10195: AO356_10195 - taurine transporter ATP-binding subunit, at 2,300,829 to 2,301,623
_10195
AO356_10200: AO356_10200 - taurine ABC transporter permease, at 2,301,620 to 2,302,459
_10200
Position (kb)
2299
2300
2301 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2298.868 kb on - strand, within AO356_10185 at 2298.895 kb on + strand, within AO356_10185 at 2298.895 kb on + strand, within AO356_10185 at 2298.895 kb on + strand, within AO356_10185 at 2298.896 kb on - strand, within AO356_10185 at 2298.899 kb on - strand, within AO356_10185 at 2298.928 kb on + strand, within AO356_10185 at 2298.928 kb on + strand, within AO356_10185 at 2298.929 kb on - strand, within AO356_10185 at 2298.976 kb on + strand, within AO356_10185 at 2298.977 kb on - strand, within AO356_10185 at 2299.066 kb on + strand, within AO356_10185 at 2299.066 kb on + strand, within AO356_10185 at 2299.066 kb on + strand, within AO356_10185 at 2299.067 kb on - strand, within AO356_10185 at 2299.067 kb on - strand, within AO356_10185 at 2299.575 kb on + strand at 2299.575 kb on + strand at 2299.576 kb on - strand at 2299.576 kb on - strand at 2299.576 kb on - strand at 2299.783 kb on - strand at 2299.970 kb on - strand, within AO356_10190 at 2300.184 kb on + strand, within AO356_10190 at 2300.184 kb on + strand, within AO356_10190 at 2300.185 kb on - strand, within AO356_10190 at 2300.245 kb on + strand, within AO356_10190 at 2300.246 kb on - strand, within AO356_10190 at 2300.362 kb on + strand, within AO356_10190 at 2300.362 kb on + strand, within AO356_10190 at 2300.362 kb on + strand, within AO356_10190 at 2300.362 kb on + strand, within AO356_10190 at 2300.362 kb on + strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.363 kb on - strand, within AO356_10190 at 2300.536 kb on + strand, within AO356_10190 at 2300.628 kb on + strand, within AO356_10190 at 2300.639 kb on + strand, within AO356_10190 at 2300.640 kb on - strand, within AO356_10190 at 2300.770 kb on + strand at 2300.771 kb on - strand at 2300.779 kb on + strand at 2300.779 kb on + strand at 2300.780 kb on - strand at 2300.780 kb on - strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.794 kb on + strand at 2300.795 kb on - strand at 2300.795 kb on - strand at 2300.795 kb on - strand at 2300.795 kb on - strand at 2300.795 kb on - strand at 2300.795 kb on - strand at 2300.839 kb on + strand at 2300.865 kb on + strand at 2300.897 kb on + strand at 2300.897 kb on + strand at 2300.898 kb on - strand at 2300.898 kb on - strand at 2300.898 kb on - strand at 2301.629 kb on + strand at 2301.629 kb on + strand at 2301.630 kb on - strand at 2301.701 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,298,868 - AO356_10185 0.55 -2.1 2,298,895 + AO356_10185 0.57 -1.4 2,298,895 + AO356_10185 0.57 -0.1 2,298,895 + AO356_10185 0.57 -1.6 2,298,896 - AO356_10185 0.57 -1.0 2,298,899 - AO356_10185 0.57 -1.5 2,298,928 + AO356_10185 0.59 -1.4 2,298,928 + AO356_10185 0.59 -2.7 2,298,929 - AO356_10185 0.59 -0.1 2,298,976 + AO356_10185 0.62 -1.1 2,298,977 - AO356_10185 0.62 -1.6 2,299,066 + AO356_10185 0.67 -1.4 2,299,066 + AO356_10185 0.67 -1.5 2,299,066 + AO356_10185 0.67 +0.6 2,299,067 - AO356_10185 0.67 +0.7 2,299,067 - AO356_10185 0.67 -1.6 2,299,575 + -0.8 2,299,575 + -0.8 2,299,576 - -2.7 2,299,576 - -4.2 2,299,576 - -0.9 2,299,783 - +0.4 2,299,970 - AO356_10190 0.14 -1.8 2,300,184 + AO356_10190 0.36 +1.3 2,300,184 + AO356_10190 0.36 -0.4 2,300,185 - AO356_10190 0.36 -1.9 2,300,245 + AO356_10190 0.42 +0.6 2,300,246 - AO356_10190 0.42 +0.5 2,300,362 + AO356_10190 0.54 -2.0 2,300,362 + AO356_10190 0.54 -0.3 2,300,362 + AO356_10190 0.54 -0.8 2,300,362 + AO356_10190 0.54 +0.2 2,300,362 + AO356_10190 0.54 -0.3 2,300,363 - AO356_10190 0.54 +0.4 2,300,363 - AO356_10190 0.54 +0.0 2,300,363 - AO356_10190 0.54 -0.9 2,300,363 - AO356_10190 0.54 -0.9 2,300,363 - AO356_10190 0.54 -0.8 2,300,363 - AO356_10190 0.54 +0.4 2,300,536 + AO356_10190 0.72 +0.4 2,300,628 + AO356_10190 0.81 -0.5 2,300,639 + AO356_10190 0.83 -0.6 2,300,640 - AO356_10190 0.83 +1.4 2,300,770 + -1.0 2,300,771 - +0.4 2,300,779 + -0.3 2,300,779 + +1.9 2,300,780 - -1.0 2,300,780 - -1.3 2,300,794 + +2.0 2,300,794 + -0.7 2,300,794 + +1.7 2,300,794 + -0.4 2,300,794 + +0.0 2,300,794 + +0.9 2,300,794 + -1.7 2,300,794 + +0.2 2,300,794 + -0.7 2,300,794 + +1.2 2,300,795 - +0.7 2,300,795 - +0.2 2,300,795 - -0.7 2,300,795 - +0.1 2,300,795 - +0.7 2,300,795 - -0.3 2,300,839 + -0.1 2,300,865 + -1.5 2,300,897 + +0.5 2,300,897 + -0.6 2,300,898 - -1.0 2,300,898 - +0.6 2,300,898 - +0.2 2,301,629 + -0.9 2,301,629 + -0.6 2,301,630 - -1.3 2,301,701 - +0.5
Or see this region's nucleotide sequence