Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09935 and AO356_09940 overlap by 11 nucleotides
AO356_09935: AO356_09935 - hypothetical protein, at 2,244,955 to 2,245,950
_09935
AO356_09940: AO356_09940 - hypothetical protein, at 2,245,940 to 2,246,323
_09940
Position (kb)
2245
2246
2247 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2245.012 kb on + strand at 2245.013 kb on - strand at 2245.095 kb on + strand, within AO356_09935 at 2245.164 kb on - strand, within AO356_09935 at 2245.195 kb on - strand, within AO356_09935 at 2245.318 kb on + strand, within AO356_09935 at 2245.319 kb on - strand, within AO356_09935 at 2245.345 kb on - strand, within AO356_09935 at 2245.368 kb on + strand, within AO356_09935 at 2245.369 kb on - strand, within AO356_09935 at 2245.372 kb on - strand, within AO356_09935 at 2245.413 kb on + strand, within AO356_09935 at 2245.419 kb on - strand, within AO356_09935 at 2245.485 kb on + strand, within AO356_09935 at 2245.485 kb on + strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.493 kb on - strand, within AO356_09935 at 2245.493 kb on - strand, within AO356_09935 at 2245.539 kb on + strand, within AO356_09935 at 2245.539 kb on + strand, within AO356_09935 at 2245.609 kb on + strand, within AO356_09935 at 2245.610 kb on - strand, within AO356_09935 at 2245.657 kb on - strand, within AO356_09935 at 2245.676 kb on - strand, within AO356_09935 at 2245.677 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.718 kb on + strand, within AO356_09935 at 2245.719 kb on - strand, within AO356_09935 at 2245.725 kb on + strand, within AO356_09935 at 2245.737 kb on + strand, within AO356_09935 at 2245.737 kb on + strand, within AO356_09935 at 2245.812 kb on + strand, within AO356_09935 at 2245.817 kb on - strand, within AO356_09935 at 2245.882 kb on - strand at 2245.882 kb on - strand at 2245.915 kb on + strand at 2245.916 kb on - strand at 2246.099 kb on + strand, within AO356_09940 at 2246.099 kb on + strand, within AO356_09940 at 2246.455 kb on + strand at 2246.757 kb on + strand at 2247.050 kb on + strand at 2247.080 kb on + strand at 2247.081 kb on - strand at 2247.081 kb on - strand at 2247.082 kb on + strand at 2247.082 kb on + strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.120 kb on + strand at 2247.121 kb on - strand at 2247.121 kb on - strand at 2247.153 kb on + strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.175 kb on + strand at 2247.175 kb on + strand at 2247.175 kb on + strand at 2247.176 kb on - strand at 2247.176 kb on - strand at 2247.187 kb on + strand at 2247.187 kb on + strand at 2247.188 kb on - strand at 2247.244 kb on + strand at 2247.274 kb on - strand at 2247.279 kb on - strand at 2247.287 kb on + strand at 2247.287 kb on + strand at 2247.287 kb on + strand at 2247.288 kb on - strand at 2247.288 kb on - strand at 2247.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,245,012 + +2.2 2,245,013 - +0.3 2,245,095 + AO356_09935 0.14 -0.6 2,245,164 - AO356_09935 0.21 +0.3 2,245,195 - AO356_09935 0.24 -0.0 2,245,318 + AO356_09935 0.36 -0.3 2,245,319 - AO356_09935 0.37 -0.7 2,245,345 - AO356_09935 0.39 +0.6 2,245,368 + AO356_09935 0.41 -0.1 2,245,369 - AO356_09935 0.42 +0.1 2,245,372 - AO356_09935 0.42 -0.4 2,245,413 + AO356_09935 0.46 +2.2 2,245,419 - AO356_09935 0.47 +2.4 2,245,485 + AO356_09935 0.53 +0.6 2,245,485 + AO356_09935 0.53 +0.5 2,245,486 - AO356_09935 0.53 -1.0 2,245,486 - AO356_09935 0.53 -2.0 2,245,486 - AO356_09935 0.53 -0.2 2,245,493 - AO356_09935 0.54 -0.4 2,245,493 - AO356_09935 0.54 -0.1 2,245,539 + AO356_09935 0.59 +0.5 2,245,539 + AO356_09935 0.59 -0.1 2,245,609 + AO356_09935 0.66 +0.4 2,245,610 - AO356_09935 0.66 +1.4 2,245,657 - AO356_09935 0.70 -0.3 2,245,676 - AO356_09935 0.72 +1.4 2,245,677 + AO356_09935 0.72 +0.1 2,245,679 + AO356_09935 0.73 +0.4 2,245,679 + AO356_09935 0.73 +0.8 2,245,679 + AO356_09935 0.73 +0.5 2,245,679 + AO356_09935 0.73 +0.6 2,245,679 + AO356_09935 0.73 +0.9 2,245,679 + AO356_09935 0.73 +1.4 2,245,718 + AO356_09935 0.77 +1.0 2,245,719 - AO356_09935 0.77 +0.0 2,245,725 + AO356_09935 0.77 +0.3 2,245,737 + AO356_09935 0.79 -0.1 2,245,737 + AO356_09935 0.79 +0.2 2,245,812 + AO356_09935 0.86 +0.6 2,245,817 - AO356_09935 0.87 -1.3 2,245,882 - +1.1 2,245,882 - -0.9 2,245,915 + +1.5 2,245,916 - -1.1 2,246,099 + AO356_09940 0.41 +1.8 2,246,099 + AO356_09940 0.41 +0.5 2,246,455 + -0.5 2,246,757 + +0.7 2,247,050 + +0.8 2,247,080 + -0.7 2,247,081 - +0.5 2,247,081 - +1.1 2,247,082 + -0.4 2,247,082 + +2.6 2,247,083 - -1.3 2,247,083 - +0.6 2,247,083 - +0.7 2,247,083 - +1.8 2,247,120 + -0.5 2,247,121 - +0.4 2,247,121 - +0.5 2,247,153 + -0.3 2,247,164 - +1.2 2,247,164 - +0.8 2,247,164 - -1.5 2,247,164 - -0.1 2,247,175 + +0.8 2,247,175 + -1.3 2,247,175 + +1.7 2,247,176 - +2.0 2,247,176 - -0.6 2,247,187 + +0.9 2,247,187 + -0.5 2,247,188 - +0.7 2,247,244 + -0.5 2,247,274 - +0.6 2,247,279 - -0.5 2,247,287 + +0.5 2,247,287 + +0.0 2,247,287 + +0.2 2,247,288 - +1.0 2,247,288 - -0.5 2,247,288 - +0.7
Or see this region's nucleotide sequence