Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08920 and AO356_08925 overlap by 1 nucleotides AO356_08925 and AO356_08930 overlap by 4 nucleotides AO356_08930 and AO356_08935 overlap by 1 nucleotides
AO356_08920: AO356_08920 - serine/threonine protein kinase, at 2,011,215 to 2,012,660
_08920
AO356_08925: AO356_08925 - lipopolysaccharide kinase, at 2,012,660 to 2,013,412
_08925
AO356_08930: AO356_08930 - heptose kinase, at 2,013,409 to 2,014,143
_08930
AO356_08935: AO356_08935 - heptose kinase, at 2,014,143 to 2,014,949
_08935
Position (kb)
2012
2013
2014 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2012.746 kb on - strand, within AO356_08925 at 2012.746 kb on - strand, within AO356_08925 at 2012.746 kb on - strand, within AO356_08925 at 2012.766 kb on - strand, within AO356_08925 at 2012.766 kb on - strand, within AO356_08925 at 2012.766 kb on - strand, within AO356_08925 at 2012.884 kb on - strand, within AO356_08925 at 2013.115 kb on - strand, within AO356_08925 at 2013.226 kb on - strand, within AO356_08925 at 2013.226 kb on - strand, within AO356_08925 at 2013.226 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.247 kb on - strand, within AO356_08925 at 2013.250 kb on - strand, within AO356_08925 at 2013.250 kb on - strand, within AO356_08925 at 2013.279 kb on - strand, within AO356_08925 at 2013.489 kb on - strand, within AO356_08930 at 2013.709 kb on - strand, within AO356_08930 at 2013.709 kb on - strand, within AO356_08930 at 2013.709 kb on - strand, within AO356_08930 at 2013.840 kb on - strand, within AO356_08930 at 2013.996 kb on - strand, within AO356_08930 at 2013.999 kb on - strand, within AO356_08930 at 2014.116 kb on - strand at 2014.116 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 2,012,746 - AO356_08925 0.11 -1.5 2,012,746 - AO356_08925 0.11 -0.8 2,012,746 - AO356_08925 0.11 -2.2 2,012,766 - AO356_08925 0.14 -3.8 2,012,766 - AO356_08925 0.14 -2.3 2,012,766 - AO356_08925 0.14 -1.8 2,012,884 - AO356_08925 0.30 -1.8 2,013,115 - AO356_08925 0.60 -1.6 2,013,226 - AO356_08925 0.75 -1.7 2,013,226 - AO356_08925 0.75 -1.3 2,013,226 - AO356_08925 0.75 -0.6 2,013,247 - AO356_08925 0.78 +0.5 2,013,247 - AO356_08925 0.78 -1.4 2,013,247 - AO356_08925 0.78 -2.1 2,013,247 - AO356_08925 0.78 -2.6 2,013,247 - AO356_08925 0.78 -0.6 2,013,247 - AO356_08925 0.78 -1.5 2,013,247 - AO356_08925 0.78 -2.1 2,013,250 - AO356_08925 0.78 -2.5 2,013,250 - AO356_08925 0.78 -1.8 2,013,279 - AO356_08925 0.82 -2.9 2,013,489 - AO356_08930 0.11 -2.0 2,013,709 - AO356_08930 0.41 +0.5 2,013,709 - AO356_08930 0.41 -0.3 2,013,709 - AO356_08930 0.41 -1.6 2,013,840 - AO356_08930 0.59 -1.6 2,013,996 - AO356_08930 0.80 -1.4 2,013,999 - AO356_08930 0.80 -1.5 2,014,116 - -1.3 2,014,116 - -1.5
Or see this region's nucleotide sequence