Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06855 and AO356_06860 are separated by 10 nucleotides AO356_06860 and AO356_06865 overlap by 1 nucleotides AO356_06865 and AO356_06870 are separated by 34 nucleotides
AO356_06855: AO356_06855 - peptide ABC transporter ATP-binding protein, at 1,512,684 to 1,513,523
_06855
AO356_06860: AO356_06860 - D-ala-D-ala transporter subunit, at 1,513,534 to 1,514,442
_06860
AO356_06865: AO356_06865 - ABC transporter permease, at 1,514,442 to 1,515,479
_06865
AO356_06870: AO356_06870 - ABC transporter substrate-binding protein, at 1,515,514 to 1,517,136
_06870
Position (kb)
1514
1515
1516 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1513.512 kb on + strand at 1513.513 kb on - strand at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.130 kb on - strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.471 kb on - strand at 1514.471 kb on - strand at 1514.471 kb on - strand at 1514.576 kb on - strand, within AO356_06865 at 1514.642 kb on - strand, within AO356_06865 at 1514.746 kb on + strand, within AO356_06865 at 1514.746 kb on + strand, within AO356_06865 at 1514.747 kb on - strand, within AO356_06865 at 1514.797 kb on + strand, within AO356_06865 at 1514.798 kb on - strand, within AO356_06865 at 1514.933 kb on - strand, within AO356_06865 at 1514.980 kb on + strand, within AO356_06865 at 1514.980 kb on + strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1515.245 kb on - strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.305 kb on - strand, within AO356_06865 at 1515.527 kb on + strand at 1515.569 kb on + strand at 1515.570 kb on - strand at 1515.570 kb on - strand at 1515.648 kb on - strand at 1515.648 kb on - strand at 1515.648 kb on - strand at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.900 kb on - strand, within AO356_06870 at 1516.145 kb on + strand, within AO356_06870 at 1516.207 kb on + strand, within AO356_06870 at 1516.253 kb on + strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.256 kb on + strand, within AO356_06870 at 1516.257 kb on - strand, within AO356_06870 at 1516.439 kb on + strand, within AO356_06870 at 1516.439 kb on + strand, within AO356_06870
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 1,513,512 + -1.0 1,513,513 - +1.4 1,513,655 + AO356_06860 0.13 -0.5 1,513,655 + AO356_06860 0.13 -1.4 1,513,655 + AO356_06860 0.13 -0.7 1,514,129 + AO356_06860 0.65 +0.4 1,514,129 + AO356_06860 0.65 -0.7 1,514,129 + AO356_06860 0.65 -0.1 1,514,129 + AO356_06860 0.65 -0.5 1,514,129 + AO356_06860 0.65 -1.9 1,514,130 - AO356_06860 0.66 +0.2 1,514,150 + AO356_06860 0.68 -0.2 1,514,150 + AO356_06860 0.68 +2.0 1,514,151 - AO356_06860 0.68 -0.8 1,514,151 - AO356_06860 0.68 +0.8 1,514,180 + AO356_06860 0.71 -0.4 1,514,180 + AO356_06860 0.71 -0.5 1,514,471 - +0.7 1,514,471 - +0.7 1,514,471 - -0.6 1,514,576 - AO356_06865 0.13 -2.0 1,514,642 - AO356_06865 0.19 +1.0 1,514,746 + AO356_06865 0.29 +1.6 1,514,746 + AO356_06865 0.29 -1.0 1,514,747 - AO356_06865 0.29 +0.2 1,514,797 + AO356_06865 0.34 +0.1 1,514,798 - AO356_06865 0.34 +0.3 1,514,933 - AO356_06865 0.47 -3.7 1,514,980 + AO356_06865 0.52 -0.3 1,514,980 + AO356_06865 0.52 +0.7 1,514,981 - AO356_06865 0.52 +0.1 1,514,981 - AO356_06865 0.52 +0.1 1,514,981 - AO356_06865 0.52 -0.7 1,514,981 - AO356_06865 0.52 -0.1 1,515,245 - AO356_06865 0.77 -1.4 1,515,292 + AO356_06865 0.82 +0.8 1,515,292 + AO356_06865 0.82 +0.5 1,515,292 + AO356_06865 0.82 -0.3 1,515,292 + AO356_06865 0.82 -0.3 1,515,305 - AO356_06865 0.83 -1.8 1,515,527 + +0.9 1,515,569 + +0.1 1,515,570 - -0.9 1,515,570 - -0.7 1,515,648 - +0.7 1,515,648 - -2.9 1,515,648 - +0.9 1,515,803 + AO356_06870 0.18 -0.1 1,515,803 + AO356_06870 0.18 +0.2 1,515,803 + AO356_06870 0.18 -0.5 1,515,803 + AO356_06870 0.18 +0.6 1,515,803 + AO356_06870 0.18 -1.6 1,515,804 - AO356_06870 0.18 +0.7 1,515,804 - AO356_06870 0.18 +0.6 1,515,804 - AO356_06870 0.18 +1.0 1,515,899 + AO356_06870 0.24 -0.4 1,515,899 + AO356_06870 0.24 -0.2 1,515,899 + AO356_06870 0.24 -0.2 1,515,900 - AO356_06870 0.24 -0.3 1,516,145 + AO356_06870 0.39 -0.7 1,516,207 + AO356_06870 0.43 +1.0 1,516,253 + AO356_06870 0.46 +0.1 1,516,254 - AO356_06870 0.46 +1.4 1,516,254 - AO356_06870 0.46 +0.2 1,516,254 - AO356_06870 0.46 +0.2 1,516,256 + AO356_06870 0.46 -0.0 1,516,257 - AO356_06870 0.46 -1.0 1,516,439 + AO356_06870 0.57 +1.1 1,516,439 + AO356_06870 0.57 -0.2
Or see this region's nucleotide sequence