Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06680 and AO356_06685 are separated by 63 nucleotides AO356_06685 and AO356_06690 are separated by 43 nucleotides
AO356_06680: AO356_06680 - preprotein translocase subunit SecD, at 1,474,897 to 1,476,765
_06680
AO356_06685: AO356_06685 - preprotein translocase subunit YajC, at 1,476,829 to 1,477,167
_06685
AO356_06690: AO356_06690 - queuine tRNA-ribosyltransferase, at 1,477,211 to 1,478,344
_06690
Position (kb)
1476
1477
1478 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1476.780 kb on - strand at 1476.817 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.917 kb on - strand, within AO356_06685 at 1477.056 kb on - strand, within AO356_06685 at 1477.150 kb on - strand at 1477.150 kb on - strand at 1477.156 kb on - strand at 1477.170 kb on - strand at 1477.188 kb on - strand at 1477.188 kb on - strand at 1477.188 kb on - strand at 1477.197 kb on - strand at 1477.197 kb on - strand at 1477.249 kb on - strand at 1477.249 kb on - strand at 1477.277 kb on - strand at 1477.310 kb on - strand at 1477.310 kb on - strand at 1477.393 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.604 kb on - strand, within AO356_06690 at 1478.156 kb on - strand, within AO356_06690
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 1,476,780 - -1.1 1,476,817 - +0.8 1,476,831 - +1.0 1,476,831 - +0.5 1,476,831 - +1.2 1,476,831 - -3.1 1,476,831 - -0.3 1,476,831 - +0.5 1,476,831 - +0.3 1,476,917 - AO356_06685 0.26 -0.7 1,477,056 - AO356_06685 0.67 +1.5 1,477,150 - +0.9 1,477,150 - +0.5 1,477,156 - +2.7 1,477,170 - +1.1 1,477,188 - -0.3 1,477,188 - -0.8 1,477,188 - -1.6 1,477,197 - +0.7 1,477,197 - -0.7 1,477,249 - +2.3 1,477,249 - +0.3 1,477,277 - +0.8 1,477,310 - +0.4 1,477,310 - +1.6 1,477,393 - AO356_06690 0.16 +2.0 1,477,420 - AO356_06690 0.18 +1.9 1,477,420 - AO356_06690 0.18 +1.6 1,477,420 - AO356_06690 0.18 +1.9 1,477,604 - AO356_06690 0.35 +1.6 1,478,156 - AO356_06690 0.83 +0.3
Or see this region's nucleotide sequence