Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06570 and AO356_06575 are separated by 201 nucleotides AO356_06575 and AO356_06580 overlap by 8 nucleotides AO356_06580 and AO356_06585 are separated by 40 nucleotides
AO356_06570: AO356_06570 - ribosome-associated GTPase EngA, at 1,455,229 to 1,456,701
_06570
AO356_06575: AO356_06575 - outer membrane protein assembly factor BamB, at 1,456,903 to 1,458,054
_06575
AO356_06580: AO356_06580 - GTP-binding protein, at 1,458,047 to 1,458,688
_06580
AO356_06585: AO356_06585 - histidinol dehydrogenase, at 1,458,729 to 1,460,018
_06585
Position (kb)
1456
1457
1458
1459 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1456.720 kb on - strand at 1456.732 kb on - strand at 1456.732 kb on - strand at 1456.732 kb on - strand at 1456.779 kb on - strand at 1456.779 kb on - strand at 1456.833 kb on - strand at 1456.833 kb on - strand at 1456.840 kb on - strand at 1456.887 kb on - strand at 1456.887 kb on - strand at 1456.899 kb on - strand at 1456.899 kb on - strand at 1456.899 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.905 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1456.950 kb on - strand at 1457.310 kb on - strand, within AO356_06575 at 1457.443 kb on - strand, within AO356_06575 at 1457.532 kb on - strand, within AO356_06575 at 1457.532 kb on - strand, within AO356_06575 at 1457.532 kb on - strand, within AO356_06575 at 1457.838 kb on - strand, within AO356_06575 at 1457.838 kb on - strand, within AO356_06575 at 1457.838 kb on - strand, within AO356_06575 at 1457.838 kb on - strand, within AO356_06575 at 1457.877 kb on - strand, within AO356_06575 at 1458.412 kb on - strand, within AO356_06580 at 1458.412 kb on - strand, within AO356_06580 at 1458.421 kb on - strand, within AO356_06580 at 1458.562 kb on - strand, within AO356_06580
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 1,456,720 - -0.1 1,456,732 - +0.0 1,456,732 - +0.5 1,456,732 - +2.1 1,456,779 - +0.0 1,456,779 - +0.1 1,456,833 - -0.0 1,456,833 - -1.6 1,456,840 - -0.7 1,456,887 - +1.4 1,456,887 - -0.0 1,456,899 - +0.5 1,456,899 - -0.5 1,456,899 - +0.9 1,456,905 - -1.8 1,456,905 - +1.3 1,456,905 - -1.0 1,456,905 - -0.2 1,456,905 - -1.9 1,456,905 - -0.6 1,456,905 - -0.7 1,456,950 - -0.1 1,456,950 - -1.5 1,456,950 - -1.3 1,456,950 - -1.5 1,456,950 - -0.7 1,456,950 - -1.0 1,456,950 - -1.3 1,456,950 - -1.0 1,456,950 - -2.0 1,457,310 - AO356_06575 0.35 -1.0 1,457,443 - AO356_06575 0.47 +0.9 1,457,532 - AO356_06575 0.55 +1.9 1,457,532 - AO356_06575 0.55 -0.7 1,457,532 - AO356_06575 0.55 -2.0 1,457,838 - AO356_06575 0.81 -1.5 1,457,838 - AO356_06575 0.81 -0.3 1,457,838 - AO356_06575 0.81 -0.7 1,457,838 - AO356_06575 0.81 -1.1 1,457,877 - AO356_06575 0.85 +1.9 1,458,412 - AO356_06580 0.57 -0.5 1,458,412 - AO356_06580 0.57 -1.4 1,458,421 - AO356_06580 0.58 +0.6 1,458,562 - AO356_06580 0.80 +0.8
Or see this region's nucleotide sequence