Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05985

Experiment: methylglyoxal 0.016 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_05975 and AO356_05980 are separated by 2 nucleotidesAO356_05980 and AO356_05985 overlap by 4 nucleotidesAO356_05985 and AO356_05990 are separated by 105 nucleotides AO356_05975: AO356_05975 - lipid-A-disaccharide synthase, at 1,325,171 to 1,326,301 _05975 AO356_05980: AO356_05980 - UDP-N-acetylglucosamine acyltransferase, at 1,326,304 to 1,327,080 _05980 AO356_05985: AO356_05985 - 3-hydroxyacyl-ACP dehydratase, at 1,327,077 to 1,327,517 _05985 AO356_05990: AO356_05990 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, at 1,327,623 to 1,328,678 _05990 Position (kb) 1327 1328Strain fitness (log2 ratio) -1 0 1 2at 1327.611 kb on - strandat 1327.622 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol%
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1,327,611 - +0.9
1,327,622 - +1.9

Or see this region's nucleotide sequence