Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05745 and AO356_05750 overlap by 14 nucleotides AO356_05750 and AO356_05755 are separated by 130 nucleotides AO356_05755 and AO356_05760 overlap by 4 nucleotides AO356_05760 and AO356_05765 are separated by 67 nucleotides
AO356_05745: AO356_05745 - hydroxyacid dehydrogenase, at 1,278,631 to 1,279,869
_05745
AO356_05750: AO356_05750 - phage tail protein, at 1,279,856 to 1,281,430
_05750
AO356_05755: AO356_05755 - ArsR family transcriptional regulator, at 1,281,561 to 1,281,857
_05755
AO356_05760: AO356_05760 - phage tail protein, at 1,281,854 to 1,282,201
_05760
AO356_05765: AO356_05765 - phage tail protein, at 1,282,269 to 1,283,765
_05765
Position (kb)
1279
1280
1281
1282 Strain fitness (log2 ratio)
-1
0
1
2 at 1278.858 kb on - strand, within AO356_05745 at 1279.307 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745 at 1279.896 kb on + strand at 1280.228 kb on - strand, within AO356_05750 at 1280.996 kb on + strand, within AO356_05750 at 1281.247 kb on + strand, within AO356_05750 at 1281.248 kb on - strand, within AO356_05750 at 1281.289 kb on + strand at 1281.290 kb on - strand at 1281.410 kb on + strand at 1281.688 kb on + strand, within AO356_05755 at 1281.688 kb on + strand, within AO356_05755 at 1281.743 kb on - strand, within AO356_05755 at 1281.743 kb on - strand, within AO356_05755 at 1281.991 kb on + strand, within AO356_05760 at 1282.080 kb on + strand, within AO356_05760 at 1282.081 kb on - strand, within AO356_05760 at 1282.173 kb on + strand at 1282.173 kb on + strand at 1282.173 kb on + strand at 1282.174 kb on - strand at 1282.285 kb on + strand at 1282.285 kb on + strand at 1282.285 kb on + strand at 1282.286 kb on - strand at 1282.336 kb on + strand at 1282.336 kb on + strand at 1282.337 kb on - strand at 1282.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 1,278,858 - AO356_05745 0.18 +0.7 1,279,307 + AO356_05745 0.55 +0.9 1,279,349 + AO356_05745 0.58 -1.0 1,279,349 + AO356_05745 0.58 +0.4 1,279,349 + AO356_05745 0.58 +0.5 1,279,350 - AO356_05745 0.58 -0.4 1,279,350 - AO356_05745 0.58 -1.2 1,279,896 + +0.4 1,280,228 - AO356_05750 0.24 -1.4 1,280,996 + AO356_05750 0.72 -0.8 1,281,247 + AO356_05750 0.88 -0.8 1,281,248 - AO356_05750 0.88 +0.2 1,281,289 + -0.2 1,281,290 - +0.8 1,281,410 + +0.8 1,281,688 + AO356_05755 0.43 +0.4 1,281,688 + AO356_05755 0.43 -1.3 1,281,743 - AO356_05755 0.61 -0.9 1,281,743 - AO356_05755 0.61 -1.5 1,281,991 + AO356_05760 0.39 +0.7 1,282,080 + AO356_05760 0.65 +0.2 1,282,081 - AO356_05760 0.65 +0.4 1,282,173 + +0.0 1,282,173 + -0.2 1,282,173 + +0.1 1,282,174 - +0.1 1,282,285 + +1.0 1,282,285 + +0.2 1,282,285 + +0.4 1,282,286 - +0.1 1,282,336 + +0.2 1,282,336 + -0.3 1,282,337 - +2.0 1,282,337 - +0.2
Or see this region's nucleotide sequence