Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04145 and AO356_04150 are separated by 155 nucleotides AO356_04150 and AO356_04155 are separated by 187 nucleotides AO356_04155 and AO356_04160 are separated by 263 nucleotides AO356_04160 and AO356_04165 are separated by 44 nucleotides
AO356_04145: AO356_04145 - hypothetical protein, at 932,500 to 933,366
_04145
AO356_04150: AO356_04150 - transcriptional regulator, at 933,522 to 933,914
_04150
AO356_04155: AO356_04155 - thioredoxin, at 934,102 to 934,833
_04155
AO356_04160: AO356_04160 - hypothetical protein, at 935,097 to 935,369
_04160
AO356_04165: AO356_04165 - hypothetical protein, at 935,414 to 935,974
_04165
Position (kb) 934
935 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 933.364 kb on + strand at 933.364 kb on + strand at 933.432 kb on - strand at 933.440 kb on + strand at 933.463 kb on + strand at 933.560 kb on + strand at 933.560 kb on + strand at 933.561 kb on - strand at 933.561 kb on - strand at 933.561 kb on - strand at 933.718 kb on + strand, within AO356_04150 at 933.718 kb on + strand, within AO356_04150 at 933.718 kb on + strand, within AO356_04150 at 933.718 kb on + strand, within AO356_04150 at 933.718 kb on + strand, within AO356_04150 at 933.719 kb on - strand, within AO356_04150 at 933.719 kb on - strand, within AO356_04150 at 933.719 kb on - strand, within AO356_04150 at 933.719 kb on - strand, within AO356_04150 at 933.719 kb on - strand, within AO356_04150 at 933.735 kb on + strand, within AO356_04150 at 933.735 kb on + strand, within AO356_04150 at 933.745 kb on + strand, within AO356_04150 at 933.817 kb on + strand, within AO356_04150 at 933.829 kb on + strand, within AO356_04150 at 933.829 kb on + strand, within AO356_04150 at 933.830 kb on - strand, within AO356_04150 at 933.902 kb on + strand at 933.902 kb on + strand at 933.902 kb on + strand at 933.904 kb on + strand at 933.904 kb on + strand at 933.904 kb on + strand at 933.904 kb on + strand at 933.904 kb on + strand at 933.904 kb on + strand at 933.905 kb on - strand at 933.905 kb on - strand at 933.905 kb on - strand at 933.905 kb on - strand at 933.905 kb on - strand at 933.945 kb on + strand at 933.945 kb on + strand at 933.946 kb on - strand at 933.946 kb on - strand at 933.946 kb on - strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.949 kb on + strand at 933.950 kb on - strand at 933.950 kb on - strand at 933.950 kb on - strand at 933.950 kb on - strand at 934.109 kb on + strand at 934.109 kb on + strand at 934.109 kb on + strand at 934.109 kb on + strand at 934.110 kb on - strand at 934.110 kb on - strand at 934.325 kb on - strand, within AO356_04155 at 934.534 kb on + strand, within AO356_04155 at 934.534 kb on + strand, within AO356_04155 at 934.534 kb on + strand, within AO356_04155 at 934.534 kb on + strand, within AO356_04155 at 934.588 kb on + strand, within AO356_04155 at 934.588 kb on + strand, within AO356_04155 at 934.588 kb on + strand, within AO356_04155 at 934.588 kb on + strand, within AO356_04155 at 934.588 kb on + strand, within AO356_04155 at 934.589 kb on - strand, within AO356_04155 at 934.589 kb on - strand, within AO356_04155 at 934.594 kb on + strand, within AO356_04155 at 934.594 kb on + strand, within AO356_04155 at 934.595 kb on - strand, within AO356_04155 at 934.645 kb on + strand, within AO356_04155 at 934.645 kb on + strand, within AO356_04155 at 934.646 kb on - strand, within AO356_04155 at 934.646 kb on - strand, within AO356_04155 at 934.646 kb on - strand, within AO356_04155 at 934.678 kb on + strand, within AO356_04155 at 934.678 kb on + strand, within AO356_04155 at 934.678 kb on + strand, within AO356_04155 at 934.678 kb on + strand, within AO356_04155 at 934.679 kb on - strand, within AO356_04155 at 934.688 kb on - strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.720 kb on + strand, within AO356_04155 at 934.721 kb on - strand, within AO356_04155 at 934.721 kb on - strand, within AO356_04155 at 934.726 kb on + strand, within AO356_04155 at 934.726 kb on + strand, within AO356_04155 at 934.727 kb on - strand, within AO356_04155 at 934.727 kb on - strand, within AO356_04155 at 934.727 kb on - strand, within AO356_04155 at 934.795 kb on + strand at 934.795 kb on + strand at 934.795 kb on + strand at 934.795 kb on + strand at 934.795 kb on + strand at 934.796 kb on - strand at 934.958 kb on - strand at 934.966 kb on + strand at 934.967 kb on - strand at 935.015 kb on + strand at 935.015 kb on + strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.016 kb on - strand at 935.017 kb on + strand at 935.017 kb on + strand at 935.033 kb on - strand at 935.078 kb on - strand at 935.096 kb on + strand at 935.096 kb on + strand at 935.106 kb on + strand at 935.107 kb on - strand at 935.107 kb on - strand at 935.107 kb on - strand at 935.291 kb on - strand, within AO356_04160 at 935.300 kb on - strand, within AO356_04160 at 935.300 kb on - strand, within AO356_04160 at 935.300 kb on - strand, within AO356_04160 at 935.300 kb on - strand, within AO356_04160 at 935.300 kb on - strand, within AO356_04160 at 935.387 kb on + strand at 935.387 kb on + strand at 935.388 kb on - strand at 935.388 kb on - strand at 935.388 kb on - strand at 935.388 kb on - strand at 935.388 kb on - strand at 935.403 kb on + strand at 935.403 kb on + strand at 935.412 kb on - strand at 935.415 kb on + strand at 935.444 kb on + strand at 935.445 kb on - strand at 935.554 kb on + strand, within AO356_04165 at 935.687 kb on + strand, within AO356_04165 at 935.687 kb on + strand, within AO356_04165 at 935.687 kb on + strand, within AO356_04165 at 935.688 kb on - strand, within AO356_04165 at 935.691 kb on + strand, within AO356_04165 at 935.692 kb on - strand, within AO356_04165 at 935.692 kb on - strand, within AO356_04165 at 935.722 kb on + strand, within AO356_04165 at 935.723 kb on - strand, within AO356_04165 at 935.724 kb on + strand, within AO356_04165 at 935.724 kb on + strand, within AO356_04165 at 935.725 kb on - strand, within AO356_04165 at 935.725 kb on - strand, within AO356_04165 at 935.748 kb on + strand, within AO356_04165 at 935.748 kb on + strand, within AO356_04165
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 933,364 + -1.2 933,364 + +0.6 933,432 - +0.4 933,440 + -0.1 933,463 + +0.8 933,560 + -0.2 933,560 + -0.5 933,561 - +0.7 933,561 - +0.4 933,561 - +0.2 933,718 + AO356_04150 0.50 +0.4 933,718 + AO356_04150 0.50 +0.8 933,718 + AO356_04150 0.50 -1.5 933,718 + AO356_04150 0.50 +0.7 933,718 + AO356_04150 0.50 -0.7 933,719 - AO356_04150 0.50 +0.8 933,719 - AO356_04150 0.50 +0.6 933,719 - AO356_04150 0.50 +1.5 933,719 - AO356_04150 0.50 +0.9 933,719 - AO356_04150 0.50 +0.6 933,735 + AO356_04150 0.54 +0.8 933,735 + AO356_04150 0.54 +0.6 933,745 + AO356_04150 0.57 +0.7 933,817 + AO356_04150 0.75 -0.4 933,829 + AO356_04150 0.78 +0.5 933,829 + AO356_04150 0.78 +1.7 933,830 - AO356_04150 0.78 -0.3 933,902 + +1.4 933,902 + +1.1 933,902 + +0.2 933,904 + +0.5 933,904 + -0.6 933,904 + -0.8 933,904 + -0.8 933,904 + +1.0 933,904 + +0.1 933,905 - -0.5 933,905 - +1.3 933,905 - +0.6 933,905 - +1.4 933,905 - +0.2 933,945 + -1.0 933,945 + +0.6 933,946 - +0.6 933,946 - +0.1 933,946 - +0.9 933,949 + -0.6 933,949 + +0.4 933,949 + +2.0 933,949 + +0.8 933,949 + -0.2 933,949 + +0.4 933,949 + -0.1 933,949 + +1.4 933,950 - +0.9 933,950 - -1.5 933,950 - -2.7 933,950 - -1.6 934,109 + +0.8 934,109 + -0.5 934,109 + +0.7 934,109 + +0.9 934,110 - +0.4 934,110 - -1.7 934,325 - AO356_04155 0.30 +0.5 934,534 + AO356_04155 0.59 +1.4 934,534 + AO356_04155 0.59 +0.9 934,534 + AO356_04155 0.59 -2.2 934,534 + AO356_04155 0.59 +1.6 934,588 + AO356_04155 0.66 +0.4 934,588 + AO356_04155 0.66 +0.1 934,588 + AO356_04155 0.66 +1.5 934,588 + AO356_04155 0.66 +0.1 934,588 + AO356_04155 0.66 -0.5 934,589 - AO356_04155 0.67 -0.0 934,589 - AO356_04155 0.67 +0.5 934,594 + AO356_04155 0.67 -0.6 934,594 + AO356_04155 0.67 +0.2 934,595 - AO356_04155 0.67 +0.0 934,645 + AO356_04155 0.74 -0.4 934,645 + AO356_04155 0.74 +1.4 934,646 - AO356_04155 0.74 +0.5 934,646 - AO356_04155 0.74 -1.9 934,646 - AO356_04155 0.74 +1.7 934,678 + AO356_04155 0.79 -0.9 934,678 + AO356_04155 0.79 -0.2 934,678 + AO356_04155 0.79 -0.1 934,678 + AO356_04155 0.79 -0.7 934,679 - AO356_04155 0.79 +0.5 934,688 - AO356_04155 0.80 +0.4 934,720 + AO356_04155 0.84 +0.8 934,720 + AO356_04155 0.84 -0.9 934,720 + AO356_04155 0.84 -1.1 934,720 + AO356_04155 0.84 +2.0 934,720 + AO356_04155 0.84 -0.3 934,720 + AO356_04155 0.84 +0.6 934,720 + AO356_04155 0.84 +0.3 934,721 - AO356_04155 0.85 +0.7 934,721 - AO356_04155 0.85 -0.2 934,726 + AO356_04155 0.85 +0.2 934,726 + AO356_04155 0.85 +0.9 934,727 - AO356_04155 0.85 +0.9 934,727 - AO356_04155 0.85 +0.6 934,727 - AO356_04155 0.85 +0.6 934,795 + +0.7 934,795 + +0.2 934,795 + -0.2 934,795 + +0.0 934,795 + -1.1 934,796 - +0.1 934,958 - +0.7 934,966 + +0.0 934,967 - -2.8 935,015 + -0.9 935,015 + +1.2 935,016 - -0.1 935,016 - -0.1 935,016 - -1.7 935,016 - -1.0 935,016 - -0.1 935,016 - +0.6 935,016 - -2.8 935,016 - -0.7 935,017 + +0.9 935,017 + -0.2 935,033 - +0.2 935,078 - -0.2 935,096 + -0.6 935,096 + +2.1 935,106 + +0.5 935,107 - -0.4 935,107 - +0.0 935,107 - +2.2 935,291 - AO356_04160 0.71 +0.6 935,300 - AO356_04160 0.74 +1.5 935,300 - AO356_04160 0.74 +2.3 935,300 - AO356_04160 0.74 -0.2 935,300 - AO356_04160 0.74 +0.9 935,300 - AO356_04160 0.74 +1.4 935,387 + +0.4 935,387 + +0.9 935,388 - +1.1 935,388 - -0.4 935,388 - +0.4 935,388 - +0.5 935,388 - -1.0 935,403 + +0.6 935,403 + -1.0 935,412 - +1.0 935,415 + +1.2 935,444 + -1.0 935,445 - -2.5 935,554 + AO356_04165 0.25 +0.2 935,687 + AO356_04165 0.49 -0.3 935,687 + AO356_04165 0.49 +2.1 935,687 + AO356_04165 0.49 -0.6 935,688 - AO356_04165 0.49 +0.6 935,691 + AO356_04165 0.49 -1.1 935,692 - AO356_04165 0.50 +1.0 935,692 - AO356_04165 0.50 +1.0 935,722 + AO356_04165 0.55 +0.4 935,723 - AO356_04165 0.55 +1.2 935,724 + AO356_04165 0.55 -0.9 935,724 + AO356_04165 0.55 -0.5 935,725 - AO356_04165 0.55 +0.9 935,725 - AO356_04165 0.55 +0.6 935,748 + AO356_04165 0.60 -1.4 935,748 + AO356_04165 0.60 -0.0
Or see this region's nucleotide sequence