Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03765 and AO356_03770 are separated by 23 nucleotides AO356_03770 and AO356_03775 overlap by 1 nucleotides AO356_03775 and AO356_03780 are separated by 0 nucleotides AO356_03780 and AO356_03785 are separated by 71 nucleotides
AO356_03765: AO356_03765 - flagellar biosynthetic protein FliQ, at 836,988 to 837,257
_03765
AO356_03770: AO356_03770 - flagellar biosynthesis protein flip, at 837,281 to 838,030
_03770
AO356_03775: AO356_03775 - flagellar assembly protein FliO, at 838,030 to 838,467
_03775
AO356_03780: AO356_03780 - flagellar motor switch protein, at 838,468 to 838,926
_03780
AO356_03785: AO356_03785 - flagellar motor switch protein FliM, at 838,998 to 839,966
_03785
Position (kb) 838
839 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.049 kb on - strand, within AO356_03765 at 837.237 kb on + strand at 837.243 kb on + strand at 837.243 kb on + strand at 837.243 kb on + strand at 837.244 kb on - strand at 837.257 kb on + strand at 837.265 kb on + strand at 837.282 kb on + strand at 837.282 kb on + strand at 837.311 kb on - strand at 837.397 kb on + strand, within AO356_03770 at 837.397 kb on + strand, within AO356_03770 at 837.398 kb on - strand, within AO356_03770 at 837.675 kb on + strand, within AO356_03770 at 837.675 kb on + strand, within AO356_03770 at 837.676 kb on - strand, within AO356_03770 at 837.676 kb on - strand, within AO356_03770 at 837.909 kb on + strand, within AO356_03770 at 837.910 kb on - strand, within AO356_03770 at 838.031 kb on + strand at 838.032 kb on - strand at 838.032 kb on - strand at 838.038 kb on + strand at 838.111 kb on + strand, within AO356_03775 at 838.864 kb on + strand, within AO356_03780 at 838.908 kb on + strand at 838.914 kb on + strand at 838.915 kb on - strand at 838.915 kb on - strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.981 kb on + strand at 838.982 kb on - strand at 838.982 kb on - strand at 838.982 kb on - strand at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.099 kb on + strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.100 kb on - strand, within AO356_03785 at 839.312 kb on - strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.434 kb on + strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785 at 839.435 kb on - strand, within AO356_03785
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 837,031 + AO356_03765 0.16 +1.0 837,031 + AO356_03765 0.16 -0.2 837,031 + AO356_03765 0.16 -2.1 837,031 + AO356_03765 0.16 -1.5 837,031 + AO356_03765 0.16 +0.2 837,031 + AO356_03765 0.16 +0.2 837,032 - AO356_03765 0.16 +1.5 837,032 - AO356_03765 0.16 +0.1 837,032 - AO356_03765 0.16 +0.1 837,032 - AO356_03765 0.16 -2.2 837,032 - AO356_03765 0.16 -1.8 837,032 - AO356_03765 0.16 -1.4 837,048 + AO356_03765 0.22 -0.9 837,048 + AO356_03765 0.22 +0.2 837,048 + AO356_03765 0.22 -1.9 837,049 - AO356_03765 0.23 -1.1 837,237 + -0.6 837,243 + +0.9 837,243 + +0.8 837,243 + +1.3 837,244 - +1.2 837,257 + -0.1 837,265 + +0.1 837,282 + +0.7 837,282 + +0.0 837,311 - -0.8 837,397 + AO356_03770 0.15 +0.4 837,397 + AO356_03770 0.15 -0.7 837,398 - AO356_03770 0.16 +0.1 837,675 + AO356_03770 0.53 -0.9 837,675 + AO356_03770 0.53 +0.7 837,676 - AO356_03770 0.53 -0.4 837,676 - AO356_03770 0.53 -1.6 837,909 + AO356_03770 0.84 +0.4 837,910 - AO356_03770 0.84 +0.4 838,031 + +1.0 838,032 - -0.5 838,032 - +0.0 838,038 + -0.0 838,111 + AO356_03775 0.18 -1.4 838,864 + AO356_03780 0.86 -1.2 838,908 + -0.5 838,914 + -0.9 838,915 - -0.2 838,915 - +0.8 838,981 + +3.1 838,981 + +0.5 838,981 + -1.1 838,981 + +0.9 838,981 + +0.7 838,981 + -0.3 838,982 - -0.1 838,982 - +0.9 838,982 - +0.0 839,099 + AO356_03785 0.10 -3.0 839,099 + AO356_03785 0.10 +0.2 839,099 + AO356_03785 0.10 -2.8 839,099 + AO356_03785 0.10 -0.2 839,099 + AO356_03785 0.10 +0.9 839,099 + AO356_03785 0.10 +0.2 839,099 + AO356_03785 0.10 +1.7 839,100 - AO356_03785 0.11 +0.7 839,100 - AO356_03785 0.11 -0.6 839,100 - AO356_03785 0.11 -1.7 839,312 - AO356_03785 0.32 +0.5 839,434 + AO356_03785 0.45 -2.5 839,434 + AO356_03785 0.45 +0.2 839,434 + AO356_03785 0.45 -0.0 839,434 + AO356_03785 0.45 +1.0 839,434 + AO356_03785 0.45 +1.1 839,434 + AO356_03785 0.45 -1.1 839,435 - AO356_03785 0.45 +0.5 839,435 - AO356_03785 0.45 -0.9 839,435 - AO356_03785 0.45 +0.9
Or see this region's nucleotide sequence