Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03665 and AO356_03670 overlap by 4 nucleotides AO356_03670 and AO356_03675 are separated by 41 nucleotides AO356_03675 and AO356_03680 are separated by 300 nucleotides
AO356_03665: AO356_03665 - flagellar hook-length control protein FliK, at 817,038 to 818,609
_03665
AO356_03670: AO356_03670 - flagellar biosynthesis protein FlhB, at 818,606 to 818,935
_03670
AO356_03675: AO356_03675 - hypothetical protein, at 818,977 to 819,423
_03675
AO356_03680: AO356_03680 - chemotaxis protein, at 819,724 to 820,119
_03680
Position (kb) 818
819 Strain fitness (log2 ratio) -2
-1
0
1
2 at 817.973 kb on + strand, within AO356_03665 at 817.974 kb on - strand, within AO356_03665 at 817.974 kb on - strand, within AO356_03665 at 818.455 kb on - strand at 818.455 kb on - strand at 818.648 kb on + strand, within AO356_03670 at 818.649 kb on - strand, within AO356_03670 at 818.649 kb on - strand, within AO356_03670 at 818.674 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.737 kb on - strand, within AO356_03670 at 818.737 kb on - strand, within AO356_03670 at 818.745 kb on - strand, within AO356_03670 at 818.814 kb on - strand, within AO356_03670 at 818.930 kb on + strand at 818.930 kb on + strand at 818.930 kb on + strand at 818.954 kb on + strand at 819.303 kb on + strand, within AO356_03675 at 819.303 kb on + strand, within AO356_03675 at 819.304 kb on - strand, within AO356_03675
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 817,973 + AO356_03665 0.59 -0.7 817,974 - AO356_03665 0.60 +0.8 817,974 - AO356_03665 0.60 -0.1 818,455 - -0.2 818,455 - +1.3 818,648 + AO356_03670 0.13 -0.3 818,649 - AO356_03670 0.13 +0.4 818,649 - AO356_03670 0.13 +0.4 818,674 + AO356_03670 0.21 +0.2 818,736 + AO356_03670 0.39 +0.8 818,736 + AO356_03670 0.39 +0.7 818,736 + AO356_03670 0.39 +0.4 818,736 + AO356_03670 0.39 +1.9 818,737 - AO356_03670 0.40 +1.3 818,737 - AO356_03670 0.40 -0.2 818,745 - AO356_03670 0.42 -1.2 818,814 - AO356_03670 0.63 +0.9 818,930 + -0.3 818,930 + +0.3 818,930 + +0.4 818,954 + -0.1 819,303 + AO356_03675 0.73 -2.1 819,303 + AO356_03675 0.73 -0.2 819,304 - AO356_03675 0.73 +1.1
Or see this region's nucleotide sequence