Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03475 and AO356_03480 are separated by 446 nucleotides AO356_03480 and AO356_03485 are separated by 106 nucleotides
AO356_03475: AO356_03475 - DNA gyrase subunit A, at 773,586 to 776,249
_03475
AO356_03480: AO356_03480 - methylthioribose-1-phosphate isomerase, at 776,696 to 777,772
_03480
AO356_03485: AO356_03485 - N-ethylammeline chlorohydrolase, at 777,879 to 779,210
_03485
Position (kb) 776
777
778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 776.362 kb on - strand at 776.446 kb on + strand at 776.446 kb on + strand at 776.447 kb on - strand at 776.470 kb on + strand at 776.470 kb on + strand at 776.470 kb on + strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.474 kb on + strand at 776.474 kb on + strand at 776.475 kb on - strand at 776.475 kb on - strand at 776.475 kb on - strand at 776.514 kb on + strand at 776.514 kb on + strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.568 kb on + strand at 776.804 kb on - strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 777.079 kb on + strand, within AO356_03480 at 777.079 kb on + strand, within AO356_03480 at 777.080 kb on - strand, within AO356_03480 at 777.211 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.226 kb on + strand, within AO356_03480 at 777.332 kb on + strand, within AO356_03480 at 777.579 kb on + strand, within AO356_03480 at 777.580 kb on - strand, within AO356_03480 at 777.580 kb on - strand, within AO356_03480 at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.708 kb on + strand at 777.708 kb on + strand at 777.708 kb on + strand at 777.709 kb on - strand at 777.709 kb on - strand at 777.709 kb on - strand at 777.758 kb on + strand at 777.759 kb on - strand at 777.808 kb on + strand at 777.809 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.839 kb on - strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.908 kb on - strand at 777.910 kb on + strand at 777.910 kb on + strand at 777.952 kb on + strand at 777.952 kb on + strand at 777.952 kb on + strand at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.467 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.536 kb on - strand, within AO356_03485 at 778.536 kb on - strand, within AO356_03485 at 778.691 kb on - strand, within AO356_03485
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 776,362 - -1.7 776,446 + +1.3 776,446 + +2.1 776,447 - +0.4 776,470 + -0.1 776,470 + -1.7 776,470 + -0.3 776,471 - +0.8 776,471 - -0.9 776,471 - -1.4 776,471 - +0.2 776,471 - -0.4 776,474 + -0.3 776,474 + +0.3 776,475 - +1.2 776,475 - +0.9 776,475 - -2.3 776,514 + +0.3 776,514 + -0.5 776,515 - +0.5 776,515 - +0.3 776,515 - -0.1 776,515 - -1.8 776,515 - +0.1 776,568 + -1.2 776,804 - AO356_03480 0.10 -0.8 776,991 + AO356_03480 0.27 -1.7 776,991 + AO356_03480 0.27 -1.4 776,991 + AO356_03480 0.27 -2.4 776,991 + AO356_03480 0.27 -0.5 776,991 + AO356_03480 0.27 -2.3 776,991 + AO356_03480 0.27 -0.0 776,991 + AO356_03480 0.27 -1.1 776,991 + AO356_03480 0.27 -0.8 777,079 + AO356_03480 0.36 -1.1 777,079 + AO356_03480 0.36 -0.2 777,080 - AO356_03480 0.36 -1.1 777,211 + AO356_03480 0.48 -1.5 777,213 + AO356_03480 0.48 -1.3 777,213 + AO356_03480 0.48 -0.9 777,213 + AO356_03480 0.48 +0.4 777,213 + AO356_03480 0.48 -1.5 777,213 + AO356_03480 0.48 -2.6 777,213 + AO356_03480 0.48 -0.7 777,213 + AO356_03480 0.48 -1.5 777,213 + AO356_03480 0.48 -2.3 777,213 + AO356_03480 0.48 +0.1 777,214 - AO356_03480 0.48 -0.8 777,214 - AO356_03480 0.48 +0.2 777,214 - AO356_03480 0.48 -0.8 777,214 - AO356_03480 0.48 -0.7 777,214 - AO356_03480 0.48 -0.7 777,214 - AO356_03480 0.48 -0.2 777,226 + AO356_03480 0.49 +1.6 777,332 + AO356_03480 0.59 -1.7 777,579 + AO356_03480 0.82 -2.1 777,580 - AO356_03480 0.82 -1.1 777,580 - AO356_03480 0.82 -0.1 777,691 + +0.1 777,691 + -0.1 777,691 + -0.1 777,691 + -1.5 777,691 + -0.6 777,691 + +0.5 777,692 - -0.3 777,692 - -2.1 777,692 - -2.3 777,692 - -0.3 777,692 - +0.1 777,692 - -0.9 777,692 - -0.5 777,692 - -0.9 777,692 - +0.5 777,692 - +0.4 777,692 - -1.1 777,708 + -1.4 777,708 + -1.2 777,708 + -1.7 777,709 - -1.5 777,709 - +0.4 777,709 - -0.9 777,758 + +0.2 777,759 - -3.1 777,808 + -0.6 777,809 - -2.6 777,811 - +0.6 777,811 - -0.7 777,811 - +0.4 777,811 - +1.5 777,811 - -0.4 777,839 - -0.1 777,840 + +0.3 777,840 + +0.1 777,840 + +0.2 777,840 + +1.4 777,855 + -0.8 777,855 + -0.5 777,855 + +1.1 777,855 + -1.3 777,855 + +1.4 777,907 + -1.3 777,907 + -0.0 777,907 + -0.3 777,907 + +0.6 777,907 + -0.6 777,907 + -1.8 777,907 + -0.4 777,907 + +1.2 777,908 - +0.0 777,910 + +0.4 777,910 + +1.0 777,952 + -0.5 777,952 + -0.8 777,952 + +0.9 778,275 + AO356_03485 0.30 -0.3 778,275 + AO356_03485 0.30 -0.6 778,275 + AO356_03485 0.30 -0.2 778,275 + AO356_03485 0.30 +0.3 778,275 + AO356_03485 0.30 -0.2 778,275 + AO356_03485 0.30 +0.9 778,275 + AO356_03485 0.30 +2.3 778,275 + AO356_03485 0.30 -0.1 778,275 + AO356_03485 0.30 +0.0 778,275 + AO356_03485 0.30 +0.1 778,275 + AO356_03485 0.30 +0.1 778,275 + AO356_03485 0.30 -2.2 778,275 + AO356_03485 0.30 +1.6 778,275 + AO356_03485 0.30 +2.0 778,275 + AO356_03485 0.30 +0.6 778,275 + AO356_03485 0.30 +0.2 778,275 + AO356_03485 0.30 +1.1 778,275 + AO356_03485 0.30 +0.6 778,467 + AO356_03485 0.44 -1.2 778,469 + AO356_03485 0.44 +0.7 778,469 + AO356_03485 0.44 +1.1 778,469 + AO356_03485 0.44 -0.3 778,469 + AO356_03485 0.44 +2.8 778,469 + AO356_03485 0.44 +2.3 778,469 + AO356_03485 0.44 +1.0 778,535 + AO356_03485 0.49 -1.0 778,535 + AO356_03485 0.49 +1.8 778,535 + AO356_03485 0.49 +1.3 778,535 + AO356_03485 0.49 -1.2 778,535 + AO356_03485 0.49 +1.3 778,535 + AO356_03485 0.49 -0.2 778,536 - AO356_03485 0.49 +0.0 778,536 - AO356_03485 0.49 +0.6 778,691 - AO356_03485 0.61 +1.8
Or see this region's nucleotide sequence