Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03425 and AO356_03430 are separated by 176 nucleotides AO356_03430 and AO356_03435 are separated by 26 nucleotides AO356_03435 and AO356_03440 are separated by 144 nucleotides AO356_03440 and AO356_03445 are separated by 231 nucleotides
AO356_03425: AO356_03425 - chain-length determining protein, at 762,784 to 763,839
_03425
AO356_03430: AO356_03430 - hypothetical protein, at 764,016 to 764,240
_03430
AO356_03435: AO356_03435 - integration host factor subunit beta, at 764,267 to 764,563
_03435
AO356_03440: AO356_03440 - hypothetical protein, at 764,708 to 764,986
_03440
AO356_03445: AO356_03445 - 30S ribosomal protein S1, at 765,218 to 766,912
_03445
Position (kb) 764
765 Strain fitness (log2 ratio) -2
-1
0
1
2 at 763.104 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.147 kb on + strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.366 kb on - strand, within AO356_03425 at 763.366 kb on - strand, within AO356_03425 at 763.417 kb on - strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.439 kb on - strand, within AO356_03425 at 763.463 kb on + strand, within AO356_03425 at 763.464 kb on - strand, within AO356_03425 at 763.515 kb on - strand, within AO356_03425 at 763.570 kb on + strand, within AO356_03425 at 763.571 kb on - strand, within AO356_03425 at 763.577 kb on + strand, within AO356_03425 at 763.595 kb on + strand, within AO356_03425 at 763.628 kb on + strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.644 kb on + strand, within AO356_03425 at 763.669 kb on - strand, within AO356_03425 at 763.703 kb on + strand, within AO356_03425 at 763.703 kb on + strand, within AO356_03425 at 763.710 kb on - strand, within AO356_03425 at 763.894 kb on + strand at 763.895 kb on - strand at 763.934 kb on - strand at 763.934 kb on - strand at 763.986 kb on + strand at 763.987 kb on - strand at 763.998 kb on - strand at 764.010 kb on + strand at 764.011 kb on - strand at 764.017 kb on + strand at 764.018 kb on - strand at 764.030 kb on + strand at 764.067 kb on + strand, within AO356_03430 at 764.068 kb on - strand, within AO356_03430 at 764.068 kb on - strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.073 kb on - strand, within AO356_03430 at 764.073 kb on - strand, within AO356_03430 at 764.170 kb on - strand, within AO356_03430 at 764.199 kb on + strand, within AO356_03430 at 764.199 kb on + strand, within AO356_03430 at 764.256 kb on + strand at 764.256 kb on + strand at 764.306 kb on - strand, within AO356_03435 at 764.306 kb on - strand, within AO356_03435 at 764.306 kb on - strand, within AO356_03435 at 764.385 kb on - strand, within AO356_03435 at 764.400 kb on + strand, within AO356_03435 at 764.613 kb on + strand at 764.614 kb on - strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.646 kb on - strand at 764.646 kb on - strand at 764.731 kb on + strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.742 kb on + strand, within AO356_03440 at 764.770 kb on - strand, within AO356_03440 at 764.814 kb on + strand, within AO356_03440 at 764.814 kb on + strand, within AO356_03440 at 764.815 kb on - strand, within AO356_03440 at 764.848 kb on + strand, within AO356_03440 at 764.848 kb on + strand, within AO356_03440 at 764.849 kb on - strand, within AO356_03440 at 764.849 kb on - strand, within AO356_03440 at 764.980 kb on + strand at 764.980 kb on + strand at 764.980 kb on + strand at 764.980 kb on + strand at 764.980 kb on + strand at 764.980 kb on + strand at 764.981 kb on - strand at 764.981 kb on - strand at 765.022 kb on + strand at 765.022 kb on + strand at 765.022 kb on + strand at 765.022 kb on + strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.023 kb on - strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.024 kb on + strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.025 kb on - strand at 765.049 kb on - strand at 765.067 kb on + strand at 765.067 kb on + strand at 765.067 kb on + strand at 765.068 kb on - strand at 765.068 kb on - strand at 765.155 kb on - strand at 765.155 kb on - strand at 765.161 kb on + strand at 765.162 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 763,104 + AO356_03425 0.30 +0.5 763,123 + AO356_03425 0.32 +0.3 763,123 + AO356_03425 0.32 -0.4 763,124 - AO356_03425 0.32 +2.1 763,124 - AO356_03425 0.32 -0.1 763,125 + AO356_03425 0.32 +0.6 763,125 + AO356_03425 0.32 +1.6 763,147 + AO356_03425 0.34 +0.6 763,255 - AO356_03425 0.45 +1.0 763,255 - AO356_03425 0.45 +1.1 763,255 - AO356_03425 0.45 +0.6 763,346 + AO356_03425 0.53 -0.6 763,346 + AO356_03425 0.53 +0.3 763,346 + AO356_03425 0.53 +1.1 763,346 + AO356_03425 0.53 +1.6 763,346 + AO356_03425 0.53 +0.9 763,346 + AO356_03425 0.53 +1.1 763,347 - AO356_03425 0.53 -0.1 763,347 - AO356_03425 0.53 +0.6 763,347 - AO356_03425 0.53 +0.6 763,347 - AO356_03425 0.53 -0.6 763,366 - AO356_03425 0.55 +1.4 763,366 - AO356_03425 0.55 -0.6 763,417 - AO356_03425 0.60 +0.2 763,438 + AO356_03425 0.62 -0.1 763,438 + AO356_03425 0.62 +2.1 763,438 + AO356_03425 0.62 +1.4 763,439 - AO356_03425 0.62 -1.7 763,463 + AO356_03425 0.64 +1.4 763,464 - AO356_03425 0.64 -0.7 763,515 - AO356_03425 0.69 +0.9 763,570 + AO356_03425 0.74 +0.6 763,571 - AO356_03425 0.75 -0.9 763,577 + AO356_03425 0.75 -0.1 763,595 + AO356_03425 0.77 +0.5 763,628 + AO356_03425 0.80 +0.2 763,629 - AO356_03425 0.80 +2.0 763,629 - AO356_03425 0.80 -0.4 763,629 - AO356_03425 0.80 -0.4 763,644 + AO356_03425 0.81 +0.9 763,669 - AO356_03425 0.84 +0.4 763,703 + AO356_03425 0.87 +1.8 763,703 + AO356_03425 0.87 +1.2 763,710 - AO356_03425 0.88 +0.8 763,894 + -0.5 763,895 - +1.1 763,934 - +1.2 763,934 - +1.4 763,986 + +0.9 763,987 - -1.1 763,998 - -0.1 764,010 + +0.7 764,011 - -0.5 764,017 + -0.5 764,018 - +1.3 764,030 + +1.7 764,067 + AO356_03430 0.23 +2.2 764,068 - AO356_03430 0.23 +2.2 764,068 - AO356_03430 0.23 +2.0 764,072 + AO356_03430 0.25 +1.8 764,072 + AO356_03430 0.25 +0.6 764,072 + AO356_03430 0.25 -0.4 764,073 - AO356_03430 0.25 +2.1 764,073 - AO356_03430 0.25 -1.2 764,170 - AO356_03430 0.68 -1.5 764,199 + AO356_03430 0.81 +1.4 764,199 + AO356_03430 0.81 +2.0 764,256 + +2.0 764,256 + +1.0 764,306 - AO356_03435 0.13 -0.5 764,306 - AO356_03435 0.13 -0.4 764,306 - AO356_03435 0.13 -0.5 764,385 - AO356_03435 0.40 -1.4 764,400 + AO356_03435 0.45 +0.7 764,613 + +2.6 764,614 - +0.9 764,645 + +1.0 764,645 + -1.0 764,645 + +1.2 764,645 + +1.0 764,646 - -0.1 764,646 - -0.4 764,731 + +1.0 764,732 - +0.8 764,732 - -2.3 764,732 - -1.1 764,732 - -1.4 764,732 - -0.7 764,742 + AO356_03440 0.12 -0.1 764,770 - AO356_03440 0.22 +0.1 764,814 + AO356_03440 0.38 +1.2 764,814 + AO356_03440 0.38 +1.3 764,815 - AO356_03440 0.38 +0.7 764,848 + AO356_03440 0.50 +0.2 764,848 + AO356_03440 0.50 +1.0 764,849 - AO356_03440 0.51 +1.1 764,849 - AO356_03440 0.51 -0.8 764,980 + +0.6 764,980 + -2.5 764,980 + -0.4 764,980 + -0.3 764,980 + +0.7 764,980 + -0.5 764,981 - -0.2 764,981 - +0.8 765,022 + +0.2 765,022 + -0.0 765,022 + +0.8 765,022 + +0.5 765,023 - +0.3 765,023 - +0.7 765,023 - +1.8 765,023 - -0.0 765,023 - +0.5 765,023 - +0.6 765,023 - +2.2 765,023 - +0.7 765,023 - -1.5 765,023 - -1.2 765,023 - +1.7 765,024 + -0.1 765,024 + +1.3 765,024 + +0.3 765,024 + +0.3 765,024 + +0.3 765,024 + +0.3 765,024 + +0.4 765,025 - -0.1 765,025 - -0.6 765,025 - +0.4 765,025 - -0.1 765,025 - +0.6 765,025 - +0.2 765,025 - +0.5 765,049 - +1.0 765,067 + -1.2 765,067 + +1.1 765,067 + +0.6 765,068 - +1.3 765,068 - +1.1 765,155 - +0.0 765,155 - -0.9 765,161 + +0.2 765,162 - +0.8
Or see this region's nucleotide sequence