Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03370 and AO356_03375 are separated by 24 nucleotides AO356_03375 and AO356_03380 are separated by 80 nucleotides AO356_03380 and AO356_03385 overlap by 1 nucleotides
AO356_03370: AO356_03370 - glycosyl transferase, at 749,982 to 751,088
_03370
AO356_03375: AO356_03375 - ExsB family protein, at 751,113 to 752,267
_03375
AO356_03380: AO356_03380 - glycosyl amidation-associated protein WbuZ, at 752,348 to 753,109
_03380
AO356_03385: AO356_03385 - imidazole glycerol phosphate synthase subunit HisH, at 753,109 to 753,717
_03385
Position (kb) 751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 750.206 kb on + strand, within AO356_03370 at 751.315 kb on + strand, within AO356_03375 at 751.394 kb on + strand, within AO356_03375 at 751.429 kb on + strand, within AO356_03375 at 751.538 kb on + strand, within AO356_03375 at 751.894 kb on + strand, within AO356_03375 at 752.354 kb on - strand at 752.519 kb on + strand, within AO356_03380 at 752.519 kb on + strand, within AO356_03380 at 752.520 kb on - strand, within AO356_03380 at 752.521 kb on + strand, within AO356_03380 at 752.521 kb on + strand, within AO356_03380 at 752.522 kb on - strand, within AO356_03380 at 752.522 kb on - strand, within AO356_03380 at 752.555 kb on + strand, within AO356_03380 at 752.588 kb on + strand, within AO356_03380 at 752.589 kb on - strand, within AO356_03380 at 752.589 kb on - strand, within AO356_03380 at 752.858 kb on - strand, within AO356_03380 at 752.882 kb on - strand, within AO356_03380 at 752.939 kb on + strand, within AO356_03380 at 752.939 kb on + strand, within AO356_03380 at 752.963 kb on + strand, within AO356_03380 at 753.116 kb on - strand at 753.190 kb on - strand, within AO356_03385 at 753.228 kb on - strand, within AO356_03385
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 750,206 + AO356_03370 0.20 -0.4 751,315 + AO356_03375 0.17 +1.1 751,394 + AO356_03375 0.24 +1.1 751,429 + AO356_03375 0.27 +4.1 751,538 + AO356_03375 0.37 +1.8 751,894 + AO356_03375 0.68 +2.0 752,354 - -2.8 752,519 + AO356_03380 0.22 +1.1 752,519 + AO356_03380 0.22 +1.4 752,520 - AO356_03380 0.23 +2.8 752,521 + AO356_03380 0.23 +0.8 752,521 + AO356_03380 0.23 +1.2 752,522 - AO356_03380 0.23 +1.9 752,522 - AO356_03380 0.23 +2.2 752,555 + AO356_03380 0.27 +0.4 752,588 + AO356_03380 0.31 +0.5 752,589 - AO356_03380 0.32 +1.8 752,589 - AO356_03380 0.32 -0.1 752,858 - AO356_03380 0.67 +1.9 752,882 - AO356_03380 0.70 +2.7 752,939 + AO356_03380 0.78 +0.1 752,939 + AO356_03380 0.78 +1.8 752,963 + AO356_03380 0.81 +2.9 753,116 - +1.4 753,190 - AO356_03385 0.13 +0.9 753,228 - AO356_03385 0.20 +0.4
Or see this region's nucleotide sequence