Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03240 and AO356_03245 are separated by 8 nucleotides AO356_03245 and AO356_03250 are separated by 249 nucleotides AO356_03250 and AO356_03255 are separated by 100 nucleotides
AO356_03240: AO356_03240 - transcription elongation factor GreB, at 719,704 to 720,201
_03240
AO356_03245: AO356_03245 - hypothetical protein, at 720,210 to 720,518
_03245
AO356_03250: AO356_03250 - DoxX family protein, at 720,768 to 721,202
_03250
AO356_03255: AO356_03255 - glycosylase, at 721,303 to 722,724
_03255
Position (kb) 720
721
722 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.878 kb on + strand, within AO356_03240 at 719.879 kb on - strand, within AO356_03240 at 719.986 kb on + strand, within AO356_03240 at 720.038 kb on - strand, within AO356_03240 at 720.175 kb on + strand at 720.175 kb on + strand at 720.176 kb on - strand at 720.176 kb on - strand at 720.410 kb on - strand, within AO356_03245 at 720.410 kb on - strand, within AO356_03245 at 720.495 kb on + strand at 720.495 kb on + strand at 720.495 kb on + strand at 720.495 kb on + strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.616 kb on - strand at 720.652 kb on + strand at 720.652 kb on + strand at 720.652 kb on + strand at 720.653 kb on - strand at 720.653 kb on - strand at 720.653 kb on - strand at 720.660 kb on + strand at 720.660 kb on + strand at 720.684 kb on + strand at 720.685 kb on - strand at 720.723 kb on + strand at 720.736 kb on + strand at 720.736 kb on + strand at 720.736 kb on + strand at 720.737 kb on - strand at 720.737 kb on - strand at 720.827 kb on + strand, within AO356_03250 at 720.828 kb on - strand, within AO356_03250 at 720.860 kb on - strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.022 kb on - strand, within AO356_03250 at 721.122 kb on + strand, within AO356_03250 at 721.122 kb on + strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.202 kb on + strand at 721.202 kb on + strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.221 kb on + strand at 721.221 kb on + strand at 721.222 kb on - strand at 721.222 kb on - strand at 721.222 kb on - strand at 721.225 kb on - strand at 721.309 kb on - strand at 721.370 kb on + strand at 721.370 kb on + strand at 721.371 kb on - strand at 721.371 kb on - strand at 721.371 kb on - strand at 721.373 kb on + strand at 721.374 kb on - strand at 721.374 kb on - strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.378 kb on - strand at 721.378 kb on - strand at 721.386 kb on + strand at 721.387 kb on - strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.414 kb on + strand at 721.414 kb on + strand at 721.415 kb on - strand at 721.523 kb on + strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.621 kb on + strand, within AO356_03255 at 721.621 kb on + strand, within AO356_03255 at 721.622 kb on - strand, within AO356_03255 at 721.622 kb on - strand, within AO356_03255 at 721.865 kb on + strand, within AO356_03255 at 721.865 kb on + strand, within AO356_03255 at 721.866 kb on - strand, within AO356_03255 at 721.877 kb on + strand, within AO356_03255 at 721.877 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.983 kb on - strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.009 kb on - strand, within AO356_03255 at 722.133 kb on + strand, within AO356_03255 at 722.134 kb on - strand, within AO356_03255
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 719,873 - AO356_03240 0.34 -1.2 719,873 - AO356_03240 0.34 +0.8 719,873 - AO356_03240 0.34 -0.9 719,873 - AO356_03240 0.34 -0.6 719,878 + AO356_03240 0.35 +0.4 719,879 - AO356_03240 0.35 -0.4 719,986 + AO356_03240 0.57 +0.1 720,038 - AO356_03240 0.67 +0.7 720,175 + -0.7 720,175 + +0.9 720,176 - +1.0 720,176 - +0.9 720,410 - AO356_03245 0.65 +1.1 720,410 - AO356_03245 0.65 +1.2 720,495 + -1.4 720,495 + -1.6 720,495 + +0.3 720,495 + +0.4 720,496 - +0.1 720,496 - +1.6 720,496 - +0.1 720,496 - -1.3 720,496 - -0.3 720,496 - -1.2 720,496 - +0.4 720,616 - -1.1 720,652 + +0.4 720,652 + -2.2 720,652 + +0.3 720,653 - -0.1 720,653 - -2.1 720,653 - +0.0 720,660 + +0.9 720,660 + -0.3 720,684 + +1.3 720,685 - -1.0 720,723 + +0.2 720,736 + +0.5 720,736 + +1.5 720,736 + -1.5 720,737 - -0.7 720,737 - +0.7 720,827 + AO356_03250 0.14 +0.0 720,828 - AO356_03250 0.14 +1.1 720,860 - AO356_03250 0.21 -0.5 721,021 + AO356_03250 0.58 +0.5 721,021 + AO356_03250 0.58 +0.0 721,021 + AO356_03250 0.58 -0.4 721,022 - AO356_03250 0.58 -1.1 721,122 + AO356_03250 0.81 +0.5 721,122 + AO356_03250 0.81 -0.9 721,123 - AO356_03250 0.82 -1.0 721,123 - AO356_03250 0.82 -0.4 721,123 - AO356_03250 0.82 +0.1 721,123 - AO356_03250 0.82 -1.4 721,202 + -0.1 721,202 + +0.5 721,203 - +0.1 721,203 - -0.9 721,203 - -0.4 721,203 - +0.8 721,221 + -1.8 721,221 + -1.5 721,222 - +0.2 721,222 - +0.9 721,222 - +0.8 721,225 - -0.4 721,309 - -0.7 721,370 + +0.0 721,370 + -1.2 721,371 - +0.6 721,371 - -1.3 721,371 - +0.8 721,373 + -0.2 721,374 - +1.0 721,374 - -0.9 721,377 + -0.3 721,377 + -2.6 721,377 + +0.1 721,377 + -0.3 721,377 + +0.1 721,378 - +1.0 721,378 - +1.2 721,386 + -0.3 721,387 - +1.6 721,389 + -0.3 721,389 + +1.3 721,389 + +0.7 721,389 + +1.6 721,390 - -0.2 721,390 - -0.5 721,390 - +0.2 721,390 - -0.1 721,390 - +0.4 721,390 - -2.5 721,394 + -0.2 721,394 + -0.5 721,394 + +0.3 721,394 + -1.1 721,394 + +1.1 721,394 + -0.5 721,395 - -0.2 721,395 - -3.2 721,395 - +0.4 721,395 - -1.6 721,395 - +0.4 721,414 + -0.4 721,414 + +0.9 721,415 - +0.2 721,523 + AO356_03255 0.15 -1.2 721,524 - AO356_03255 0.16 +0.2 721,524 - AO356_03255 0.16 +0.2 721,524 - AO356_03255 0.16 -1.6 721,604 + AO356_03255 0.21 +1.5 721,604 + AO356_03255 0.21 +0.6 721,604 + AO356_03255 0.21 -0.5 721,604 + AO356_03255 0.21 -0.0 721,621 + AO356_03255 0.22 +0.5 721,621 + AO356_03255 0.22 +0.7 721,622 - AO356_03255 0.22 +0.5 721,622 - AO356_03255 0.22 +0.5 721,865 + AO356_03255 0.40 -0.4 721,865 + AO356_03255 0.40 -0.6 721,866 - AO356_03255 0.40 -0.2 721,877 + AO356_03255 0.40 +1.0 721,877 + AO356_03255 0.40 -0.7 721,919 + AO356_03255 0.43 +1.0 721,919 + AO356_03255 0.43 +0.6 721,919 + AO356_03255 0.43 +0.7 721,919 + AO356_03255 0.43 +0.9 721,919 + AO356_03255 0.43 +1.2 721,919 + AO356_03255 0.43 +0.3 721,919 + AO356_03255 0.43 +0.3 721,919 + AO356_03255 0.43 +0.1 721,920 - AO356_03255 0.43 +0.8 721,920 - AO356_03255 0.43 -1.0 721,920 - AO356_03255 0.43 -2.5 721,920 - AO356_03255 0.43 +0.4 721,983 - AO356_03255 0.48 -0.1 722,008 + AO356_03255 0.50 +0.9 722,008 + AO356_03255 0.50 -0.0 722,008 + AO356_03255 0.50 +1.3 722,009 - AO356_03255 0.50 +0.4 722,133 + AO356_03255 0.58 +0.6 722,134 - AO356_03255 0.58 +0.7
Or see this region's nucleotide sequence