Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03080 and AO356_03085 are separated by 186 nucleotides AO356_03085 and AO356_03090 are separated by 221 nucleotides AO356_03090 and AO356_03095 are separated by 302 nucleotides
AO356_03080: AO356_03080 - glutathione peroxidase, at 689,305 to 689,790
_03080
AO356_03085: AO356_03085 - peptide methionine sulfoxide reductase, at 689,977 to 690,372
_03085
AO356_03090: AO356_03090 - aminotransferase, at 690,594 to 691,805
_03090
AO356_03095: AO356_03095 - protease HtpX, at 692,108 to 692,995
_03095
Position (kb) 690
691
692 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 689.633 kb on + strand, within AO356_03080 at 689.633 kb on + strand, within AO356_03080 at 689.633 kb on + strand, within AO356_03080 at 689.633 kb on + strand, within AO356_03080 at 689.633 kb on + strand, within AO356_03080 at 689.634 kb on - strand, within AO356_03080 at 689.634 kb on - strand, within AO356_03080 at 689.634 kb on - strand, within AO356_03080 at 689.634 kb on - strand, within AO356_03080 at 689.663 kb on + strand, within AO356_03080 at 689.664 kb on - strand, within AO356_03080 at 689.664 kb on - strand, within AO356_03080 at 689.664 kb on - strand, within AO356_03080 at 689.664 kb on - strand, within AO356_03080 at 689.805 kb on + strand at 689.805 kb on + strand at 689.805 kb on + strand at 689.806 kb on - strand at 689.853 kb on - strand at 689.855 kb on + strand at 689.971 kb on + strand at 689.971 kb on + strand at 689.971 kb on + strand at 689.971 kb on + strand at 689.972 kb on - strand at 689.972 kb on - strand at 690.020 kb on + strand, within AO356_03085 at 690.161 kb on + strand, within AO356_03085 at 690.161 kb on + strand, within AO356_03085 at 690.239 kb on + strand, within AO356_03085 at 690.239 kb on + strand, within AO356_03085 at 690.239 kb on + strand, within AO356_03085 at 690.240 kb on - strand, within AO356_03085 at 690.266 kb on + strand, within AO356_03085 at 690.266 kb on + strand, within AO356_03085 at 690.266 kb on + strand, within AO356_03085 at 690.266 kb on + strand, within AO356_03085 at 690.266 kb on + strand, within AO356_03085 at 690.267 kb on - strand, within AO356_03085 at 690.267 kb on - strand, within AO356_03085 at 690.315 kb on - strand, within AO356_03085 at 690.315 kb on - strand, within AO356_03085 at 690.315 kb on - strand, within AO356_03085 at 690.378 kb on + strand at 690.379 kb on - strand at 690.379 kb on - strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.434 kb on + strand at 690.435 kb on - strand at 690.435 kb on - strand at 690.435 kb on - strand at 690.435 kb on - strand at 690.502 kb on + strand at 690.502 kb on + strand at 690.502 kb on + strand at 690.502 kb on + strand at 690.503 kb on - strand at 690.503 kb on - strand at 690.503 kb on - strand at 690.543 kb on + strand at 690.543 kb on + strand at 690.543 kb on + strand at 690.543 kb on + strand at 690.543 kb on + strand at 690.544 kb on - strand at 690.544 kb on - strand at 690.548 kb on + strand at 690.556 kb on - strand at 690.556 kb on - strand at 690.633 kb on + strand at 690.633 kb on + strand at 690.634 kb on - strand at 690.840 kb on + strand, within AO356_03090 at 690.840 kb on + strand, within AO356_03090 at 690.840 kb on + strand, within AO356_03090 at 690.841 kb on - strand, within AO356_03090 at 690.841 kb on - strand, within AO356_03090 at 690.843 kb on + strand, within AO356_03090 at 690.843 kb on + strand, within AO356_03090 at 690.843 kb on + strand, within AO356_03090 at 690.843 kb on + strand, within AO356_03090 at 690.844 kb on - strand, within AO356_03090 at 690.844 kb on - strand, within AO356_03090 at 690.885 kb on + strand, within AO356_03090 at 690.885 kb on + strand, within AO356_03090 at 690.885 kb on + strand, within AO356_03090 at 690.886 kb on - strand, within AO356_03090 at 690.886 kb on - strand, within AO356_03090 at 690.886 kb on - strand, within AO356_03090 at 690.886 kb on - strand, within AO356_03090 at 690.886 kb on - strand, within AO356_03090 at 691.026 kb on + strand, within AO356_03090 at 691.026 kb on + strand, within AO356_03090 at 691.026 kb on + strand, within AO356_03090 at 691.027 kb on - strand, within AO356_03090 at 691.027 kb on - strand, within AO356_03090 at 691.027 kb on - strand, within AO356_03090 at 691.027 kb on - strand, within AO356_03090 at 691.095 kb on - strand, within AO356_03090 at 691.143 kb on + strand, within AO356_03090 at 691.219 kb on - strand, within AO356_03090 at 691.315 kb on - strand, within AO356_03090 at 691.380 kb on + strand, within AO356_03090 at 691.380 kb on + strand, within AO356_03090 at 691.380 kb on + strand, within AO356_03090 at 691.381 kb on - strand, within AO356_03090 at 691.381 kb on - strand, within AO356_03090 at 691.381 kb on - strand, within AO356_03090 at 691.381 kb on - strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.587 kb on + strand, within AO356_03090 at 691.588 kb on - strand, within AO356_03090 at 691.588 kb on - strand, within AO356_03090 at 691.588 kb on - strand, within AO356_03090 at 691.588 kb on - strand, within AO356_03090 at 691.588 kb on - strand, within AO356_03090 at 691.795 kb on - strand at 691.795 kb on - strand at 691.803 kb on + strand at 691.803 kb on + strand at 691.803 kb on + strand at 691.804 kb on - strand at 691.804 kb on - strand at 691.859 kb on + strand at 691.860 kb on - strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.890 kb on - strand at 691.894 kb on + strand at 691.951 kb on + strand at 691.951 kb on + strand at 691.952 kb on - strand at 691.952 kb on - strand at 691.952 kb on - strand at 691.995 kb on + strand at 692.023 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.057 kb on + strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.058 kb on - strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.059 kb on + strand at 692.060 kb on - strand at 692.060 kb on - strand at 692.060 kb on - strand at 692.060 kb on - strand at 692.060 kb on - strand at 692.060 kb on - strand at 692.076 kb on + strand at 692.076 kb on + strand at 692.076 kb on + strand at 692.077 kb on - strand at 692.077 kb on - strand at 692.077 kb on - strand at 692.084 kb on + strand at 692.085 kb on - strand at 692.137 kb on + strand at 692.138 kb on - strand at 692.435 kb on + strand, within AO356_03095 at 692.645 kb on - strand, within AO356_03095 at 692.645 kb on - strand, within AO356_03095 at 692.645 kb on - strand, within AO356_03095 at 692.696 kb on + strand, within AO356_03095 at 692.697 kb on - strand, within AO356_03095 at 692.699 kb on + strand, within AO356_03095 at 692.699 kb on + strand, within AO356_03095 at 692.699 kb on + strand, within AO356_03095 at 692.699 kb on + strand, within AO356_03095 at 692.699 kb on + strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.700 kb on - strand, within AO356_03095 at 692.727 kb on + strand, within AO356_03095 at 692.728 kb on - strand, within AO356_03095
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 689,633 + AO356_03080 0.67 +0.8 689,633 + AO356_03080 0.67 +1.0 689,633 + AO356_03080 0.67 +1.3 689,633 + AO356_03080 0.67 -0.1 689,633 + AO356_03080 0.67 -0.1 689,634 - AO356_03080 0.68 +1.5 689,634 - AO356_03080 0.68 -0.0 689,634 - AO356_03080 0.68 -1.0 689,634 - AO356_03080 0.68 +0.6 689,663 + AO356_03080 0.74 -0.9 689,664 - AO356_03080 0.74 +0.6 689,664 - AO356_03080 0.74 +2.1 689,664 - AO356_03080 0.74 +1.3 689,664 - AO356_03080 0.74 -0.4 689,805 + +1.2 689,805 + +0.3 689,805 + +0.8 689,806 - +1.1 689,853 - -0.4 689,855 + -1.2 689,971 + -0.4 689,971 + -0.2 689,971 + +1.8 689,971 + -1.6 689,972 - -0.1 689,972 - +0.6 690,020 + AO356_03085 0.11 +0.8 690,161 + AO356_03085 0.46 -0.3 690,161 + AO356_03085 0.46 +2.1 690,239 + AO356_03085 0.66 +0.6 690,239 + AO356_03085 0.66 +1.9 690,239 + AO356_03085 0.66 +0.3 690,240 - AO356_03085 0.66 -0.0 690,266 + AO356_03085 0.73 -0.8 690,266 + AO356_03085 0.73 +0.2 690,266 + AO356_03085 0.73 +1.8 690,266 + AO356_03085 0.73 +0.7 690,266 + AO356_03085 0.73 +0.8 690,267 - AO356_03085 0.73 +1.0 690,267 - AO356_03085 0.73 +0.5 690,315 - AO356_03085 0.85 -0.1 690,315 - AO356_03085 0.85 -0.7 690,315 - AO356_03085 0.85 -0.4 690,378 + +0.4 690,379 - +0.2 690,379 - -2.0 690,434 + -0.1 690,434 + +0.8 690,434 + -0.4 690,434 + -0.7 690,434 + -1.2 690,434 + +1.5 690,434 + -1.7 690,434 + +0.5 690,434 + -0.2 690,435 - +0.6 690,435 - +0.4 690,435 - -2.2 690,435 - +0.8 690,502 + +0.8 690,502 + -0.5 690,502 + +1.3 690,502 + -0.1 690,503 - -1.8 690,503 - -0.6 690,503 - +0.9 690,543 + +0.2 690,543 + -1.4 690,543 + -0.3 690,543 + -0.5 690,543 + +0.4 690,544 - -0.3 690,544 - -0.2 690,548 + +0.5 690,556 - -0.5 690,556 - -0.4 690,633 + -1.1 690,633 + -0.1 690,634 - -0.7 690,840 + AO356_03090 0.20 +0.9 690,840 + AO356_03090 0.20 -0.3 690,840 + AO356_03090 0.20 +0.6 690,841 - AO356_03090 0.20 -0.3 690,841 - AO356_03090 0.20 -0.8 690,843 + AO356_03090 0.21 +0.5 690,843 + AO356_03090 0.21 +1.4 690,843 + AO356_03090 0.21 +1.8 690,843 + AO356_03090 0.21 -1.3 690,844 - AO356_03090 0.21 +0.2 690,844 - AO356_03090 0.21 -0.3 690,885 + AO356_03090 0.24 +0.4 690,885 + AO356_03090 0.24 +0.0 690,885 + AO356_03090 0.24 -2.2 690,886 - AO356_03090 0.24 +0.5 690,886 - AO356_03090 0.24 +2.1 690,886 - AO356_03090 0.24 +1.8 690,886 - AO356_03090 0.24 -0.9 690,886 - AO356_03090 0.24 -0.8 691,026 + AO356_03090 0.36 -0.1 691,026 + AO356_03090 0.36 -0.4 691,026 + AO356_03090 0.36 -1.2 691,027 - AO356_03090 0.36 +0.1 691,027 - AO356_03090 0.36 -0.6 691,027 - AO356_03090 0.36 -1.2 691,027 - AO356_03090 0.36 -0.6 691,095 - AO356_03090 0.41 +0.5 691,143 + AO356_03090 0.45 +0.0 691,219 - AO356_03090 0.52 -0.5 691,315 - AO356_03090 0.59 +1.4 691,380 + AO356_03090 0.65 +0.4 691,380 + AO356_03090 0.65 -0.1 691,380 + AO356_03090 0.65 +0.2 691,381 - AO356_03090 0.65 -0.3 691,381 - AO356_03090 0.65 +1.6 691,381 - AO356_03090 0.65 -0.5 691,381 - AO356_03090 0.65 -2.0 691,587 + AO356_03090 0.82 -0.3 691,587 + AO356_03090 0.82 +0.3 691,587 + AO356_03090 0.82 +1.5 691,587 + AO356_03090 0.82 +0.5 691,587 + AO356_03090 0.82 +0.4 691,587 + AO356_03090 0.82 -0.8 691,588 - AO356_03090 0.82 -0.2 691,588 - AO356_03090 0.82 +1.2 691,588 - AO356_03090 0.82 +0.2 691,588 - AO356_03090 0.82 -0.8 691,588 - AO356_03090 0.82 -2.5 691,795 - +0.3 691,795 - +0.8 691,803 + +0.5 691,803 + +0.0 691,803 + -2.0 691,804 - +0.2 691,804 - +0.9 691,859 + -0.8 691,860 - +0.1 691,889 + -1.4 691,889 + -0.2 691,889 + -0.7 691,890 - +0.3 691,890 - -0.5 691,890 - -0.4 691,890 - -0.8 691,890 - +0.7 691,890 - +0.5 691,890 - +1.6 691,894 + -0.4 691,951 + +0.1 691,951 + -1.7 691,952 - -0.8 691,952 - +0.7 691,952 - -0.3 691,995 + -1.2 692,023 + +0.6 692,057 + +0.8 692,057 + -2.4 692,057 + -0.6 692,057 + +0.2 692,057 + +0.0 692,057 + +0.9 692,057 + -0.1 692,057 + +0.6 692,057 + -1.0 692,057 + +1.1 692,057 + -1.3 692,057 + -0.5 692,057 + -0.5 692,057 + -0.1 692,058 - +0.7 692,058 - +0.1 692,058 - +0.6 692,058 - +0.4 692,058 - +1.2 692,058 - +0.2 692,058 - +1.5 692,058 - +0.7 692,058 - +1.3 692,058 - -0.9 692,058 - +0.4 692,058 - +1.6 692,058 - +0.5 692,058 - +1.3 692,059 + -0.8 692,059 + +0.0 692,059 + -0.6 692,059 + +1.5 692,059 + +0.1 692,059 + +0.8 692,059 + -1.1 692,059 + +0.6 692,059 + +1.8 692,059 + +1.7 692,060 - +3.4 692,060 - +1.2 692,060 - +1.0 692,060 - -0.0 692,060 - +0.4 692,060 - -1.7 692,076 + -1.0 692,076 + -1.8 692,076 + +0.8 692,077 - -1.1 692,077 - +0.4 692,077 - +1.0 692,084 + +0.3 692,085 - -0.2 692,137 + -1.6 692,138 - +2.7 692,435 + AO356_03095 0.37 -0.6 692,645 - AO356_03095 0.60 +1.8 692,645 - AO356_03095 0.60 +1.1 692,645 - AO356_03095 0.60 +1.6 692,696 + AO356_03095 0.66 +0.2 692,697 - AO356_03095 0.66 +2.6 692,699 + AO356_03095 0.67 +2.0 692,699 + AO356_03095 0.67 +0.0 692,699 + AO356_03095 0.67 +1.3 692,699 + AO356_03095 0.67 +1.0 692,699 + AO356_03095 0.67 +1.3 692,700 - AO356_03095 0.67 +1.4 692,700 - AO356_03095 0.67 -0.9 692,700 - AO356_03095 0.67 +1.0 692,700 - AO356_03095 0.67 +1.8 692,700 - AO356_03095 0.67 +0.6 692,700 - AO356_03095 0.67 +0.7 692,727 + AO356_03095 0.70 -0.4 692,728 - AO356_03095 0.70 +0.5
Or see this region's nucleotide sequence