Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02425 and AO356_02430 overlap by 1 nucleotides AO356_02430 and AO356_02435 are separated by 5 nucleotides AO356_02435 and AO356_02440 overlap by 4 nucleotides AO356_02440 and AO356_02445 are separated by 149 nucleotides AO356_02445 and AO356_02450 overlap by 1 nucleotides
AO356_02425: AO356_02425 - cytochrome C oxidase Cbb3, at 528,679 to 530,121
_02425
AO356_02430: AO356_02430 - cytochrome C oxidase Cbb3, at 530,121 to 530,729
_02430
AO356_02435: AO356_02435 - cytochrome oxidase, at 530,735 to 530,920
_02435
AO356_02440: AO356_02440 - cytochrome C oxidase Cbb3, at 530,917 to 531,900
_02440
AO356_02445: AO356_02445 - prevent-host-death protein, at 532,050 to 532,304
_02445
AO356_02450: AO356_02450 - twitching motility protein PilT, at 532,304 to 532,726
_02450
Position (kb) 530
531
532 Strain fitness (log2 ratio) -1
0
1
2 at 529.943 kb on - strand, within AO356_02425 at 529.943 kb on - strand, within AO356_02425 at 529.943 kb on - strand, within AO356_02425 at 529.988 kb on + strand at 529.989 kb on - strand at 529.989 kb on - strand at 530.039 kb on - strand at 530.105 kb on + strand at 530.295 kb on + strand, within AO356_02430 at 530.295 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.616 kb on + strand, within AO356_02430 at 530.617 kb on - strand, within AO356_02430 at 530.617 kb on - strand, within AO356_02430 at 530.688 kb on + strand at 530.688 kb on + strand at 530.688 kb on + strand at 530.902 kb on + strand at 530.902 kb on + strand at 530.902 kb on + strand at 530.903 kb on - strand at 530.939 kb on - strand at 530.939 kb on - strand at 530.939 kb on - strand at 530.962 kb on - strand at 531.064 kb on + strand, within AO356_02440 at 531.065 kb on - strand, within AO356_02440 at 531.065 kb on - strand, within AO356_02440 at 531.181 kb on + strand, within AO356_02440 at 531.181 kb on + strand, within AO356_02440 at 531.182 kb on - strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.187 kb on + strand, within AO356_02440 at 531.188 kb on - strand, within AO356_02440 at 531.188 kb on - strand, within AO356_02440 at 531.568 kb on + strand, within AO356_02440 at 531.568 kb on + strand, within AO356_02440 at 531.736 kb on + strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.848 kb on - strand at 531.848 kb on - strand at 531.853 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.917 kb on - strand at 531.986 kb on + strand at 532.035 kb on - strand at 532.064 kb on + strand at 532.064 kb on + strand at 532.065 kb on - strand at 532.065 kb on - strand at 532.168 kb on + strand, within AO356_02445 at 532.169 kb on - strand, within AO356_02445 at 532.183 kb on - strand, within AO356_02445 at 532.183 kb on - strand, within AO356_02445 at 532.307 kb on + strand at 532.307 kb on + strand at 532.307 kb on + strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.357 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.366 kb on - strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.404 kb on - strand, within AO356_02450 at 532.404 kb on - strand, within AO356_02450 at 532.423 kb on - strand, within AO356_02450 at 532.740 kb on - strand at 532.773 kb on - strand at 532.846 kb on + strand at 532.847 kb on - strand at 532.891 kb on + strand at 532.891 kb on + strand at 532.891 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 529,943 - AO356_02425 0.88 +0.5 529,943 - AO356_02425 0.88 +1.3 529,943 - AO356_02425 0.88 +1.1 529,988 + +1.2 529,989 - +2.2 529,989 - +1.5 530,039 - +0.8 530,105 + +0.5 530,295 + AO356_02430 0.29 +2.7 530,295 + AO356_02430 0.29 -0.5 530,493 + AO356_02430 0.61 +0.2 530,493 + AO356_02430 0.61 +1.0 530,493 + AO356_02430 0.61 +0.3 530,494 - AO356_02430 0.61 -0.5 530,494 - AO356_02430 0.61 +1.2 530,494 - AO356_02430 0.61 -1.1 530,494 - AO356_02430 0.61 +0.1 530,494 - AO356_02430 0.61 -0.3 530,494 - AO356_02430 0.61 +0.2 530,494 - AO356_02430 0.61 +2.1 530,494 - AO356_02430 0.61 +1.3 530,616 + AO356_02430 0.81 +1.6 530,617 - AO356_02430 0.81 +0.6 530,617 - AO356_02430 0.81 +0.5 530,688 + +1.2 530,688 + +1.7 530,688 + +1.5 530,902 + +0.5 530,902 + +1.2 530,902 + -0.2 530,903 - +1.5 530,939 - +0.9 530,939 - +1.1 530,939 - -0.4 530,962 - +1.7 531,064 + AO356_02440 0.15 +0.7 531,065 - AO356_02440 0.15 +0.8 531,065 - AO356_02440 0.15 -0.7 531,181 + AO356_02440 0.27 +0.2 531,181 + AO356_02440 0.27 +1.4 531,182 - AO356_02440 0.27 +1.6 531,183 + AO356_02440 0.27 +1.9 531,183 + AO356_02440 0.27 +1.2 531,183 + AO356_02440 0.27 +1.9 531,183 + AO356_02440 0.27 +1.2 531,184 - AO356_02440 0.27 +2.3 531,184 - AO356_02440 0.27 +0.9 531,184 - AO356_02440 0.27 +0.9 531,184 - AO356_02440 0.27 +1.7 531,184 - AO356_02440 0.27 +0.3 531,184 - AO356_02440 0.27 -1.1 531,187 + AO356_02440 0.27 +1.7 531,188 - AO356_02440 0.28 +0.7 531,188 - AO356_02440 0.28 +1.8 531,568 + AO356_02440 0.66 +1.4 531,568 + AO356_02440 0.66 +1.0 531,736 + AO356_02440 0.83 +0.1 531,737 - AO356_02440 0.83 +0.9 531,737 - AO356_02440 0.83 +1.4 531,737 - AO356_02440 0.83 +1.0 531,848 - +1.0 531,848 - +0.2 531,853 + -1.1 531,916 + -0.1 531,916 + -1.1 531,916 + +0.5 531,916 + +2.3 531,917 - -0.0 531,986 + +1.6 532,035 - +0.2 532,064 + +1.8 532,064 + +0.1 532,065 - +0.3 532,065 - +0.5 532,168 + AO356_02445 0.46 +0.0 532,169 - AO356_02445 0.47 +1.0 532,183 - AO356_02445 0.52 -0.4 532,183 - AO356_02445 0.52 +0.6 532,307 + +1.0 532,307 + -0.5 532,307 + +0.3 532,308 - +0.7 532,308 - +0.6 532,308 - +0.7 532,308 - -0.8 532,308 - +1.8 532,308 - -0.4 532,357 + AO356_02450 0.13 -0.6 532,365 + AO356_02450 0.14 -0.2 532,365 + AO356_02450 0.14 +0.9 532,365 + AO356_02450 0.14 +1.7 532,366 - AO356_02450 0.15 +1.0 532,403 + AO356_02450 0.23 -0.1 532,403 + AO356_02450 0.23 -0.8 532,403 + AO356_02450 0.23 -0.1 532,404 - AO356_02450 0.24 -0.2 532,404 - AO356_02450 0.24 -0.9 532,423 - AO356_02450 0.28 -0.4 532,740 - +0.8 532,773 - -0.2 532,846 + -0.2 532,847 - +1.1 532,891 + +0.5 532,891 + +0.7 532,891 + -0.7
Or see this region's nucleotide sequence