Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02285 and AO356_02290 are separated by 171 nucleotides AO356_02290 and AO356_02295 are separated by 241 nucleotides AO356_02295 and AO356_02300 are separated by 10 nucleotides
AO356_02285: AO356_02285 - beta-hexosaminidase, at 494,844 to 495,854
_02285
AO356_02290: AO356_02290 - TetR family transcriptional regulator, at 496,026 to 496,733
_02290
AO356_02295: AO356_02295 - LexA family transcriptional regulator, at 496,975 to 497,583
_02295
AO356_02300: AO356_02300 - CDP-glycerol--UDP-pyrophosphoryl-N- acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase, at 497,594 to 498,067
_02300
Position (kb)
496
497 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 495.208 kb on + strand, within AO356_02285 at 495.209 kb on - strand, within AO356_02285 at 495.209 kb on - strand, within AO356_02285 at 495.479 kb on - strand, within AO356_02285 at 495.568 kb on + strand, within AO356_02285 at 495.568 kb on + strand, within AO356_02285 at 495.569 kb on - strand, within AO356_02285 at 495.669 kb on + strand, within AO356_02285 at 495.670 kb on - strand, within AO356_02285 at 495.762 kb on + strand at 495.854 kb on + strand at 495.855 kb on - strand at 495.855 kb on - strand at 495.865 kb on + strand at 495.865 kb on + strand at 495.866 kb on - strand at 495.868 kb on + strand at 495.869 kb on - strand at 495.944 kb on + strand at 495.945 kb on - strand at 495.945 kb on - strand at 495.988 kb on - strand at 495.993 kb on - strand at 496.314 kb on - strand, within AO356_02290 at 496.314 kb on - strand, within AO356_02290 at 496.314 kb on - strand, within AO356_02290 at 496.316 kb on - strand, within AO356_02290 at 496.316 kb on - strand, within AO356_02290 at 496.337 kb on - strand, within AO356_02290 at 496.485 kb on - strand, within AO356_02290 at 496.485 kb on - strand, within AO356_02290 at 496.769 kb on - strand at 496.769 kb on - strand at 496.827 kb on + strand at 496.827 kb on + strand at 496.827 kb on + strand at 496.828 kb on - strand at 496.831 kb on + strand at 496.831 kb on + strand at 496.831 kb on + strand at 496.832 kb on - strand at 496.832 kb on - strand at 496.933 kb on + strand at 496.935 kb on + strand at 496.937 kb on + strand at 496.954 kb on + strand at 496.979 kb on + strand at 497.581 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.594 kb on - strand at 497.594 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 495,208 + AO356_02285 0.36 +1.1 495,209 - AO356_02285 0.36 -0.6 495,209 - AO356_02285 0.36 +0.0 495,479 - AO356_02285 0.63 -0.7 495,568 + AO356_02285 0.72 +0.9 495,568 + AO356_02285 0.72 +0.1 495,569 - AO356_02285 0.72 +0.6 495,669 + AO356_02285 0.82 -0.1 495,670 - AO356_02285 0.82 -0.2 495,762 + -0.2 495,854 + -0.8 495,855 - -0.0 495,855 - +0.5 495,865 + -0.2 495,865 + +0.0 495,866 - +0.3 495,868 + +0.5 495,869 - -2.1 495,944 + +0.5 495,945 - +0.1 495,945 - +0.7 495,988 - +1.4 495,993 - -0.6 496,314 - AO356_02290 0.41 -0.5 496,314 - AO356_02290 0.41 -0.8 496,314 - AO356_02290 0.41 -0.4 496,316 - AO356_02290 0.41 +2.6 496,316 - AO356_02290 0.41 +0.5 496,337 - AO356_02290 0.44 +3.3 496,485 - AO356_02290 0.65 +0.6 496,485 - AO356_02290 0.65 +2.5 496,769 - +0.7 496,769 - -0.2 496,827 + -2.2 496,827 + -0.6 496,827 + -0.5 496,828 - +1.7 496,831 + +1.3 496,831 + +1.2 496,831 + +0.4 496,832 - +1.4 496,832 - +0.1 496,933 + -1.1 496,935 + +0.4 496,937 + -0.3 496,954 + -0.6 496,979 + +2.2 497,581 + -0.3 497,593 + +0.9 497,593 + -0.3 497,593 + -0.1 497,593 + -0.1 497,593 + -0.2 497,593 + +0.5 497,593 + -0.9 497,593 + +0.2 497,594 - +0.2 497,594 - +0.4
Or see this region's nucleotide sequence