Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01715 and AO356_01720 are separated by 279 nucleotides AO356_01720 and AO356_01725 are separated by 344 nucleotides
AO356_01715: AO356_01715 - AraC family transcriptional regulator, at 386,745 to 387,782
_01715
AO356_01720: AO356_01720 - hypothetical protein, at 388,062 to 388,955
_01720
AO356_01725: AO356_01725 - peptidylprolyl isomerase, at 389,300 to 391,171
_01725
Position (kb) 388
389 Strain fitness (log2 ratio) -2
-1
0
1
2 at 387.078 kb on + strand, within AO356_01715 at 387.078 kb on + strand, within AO356_01715 at 387.079 kb on - strand, within AO356_01715 at 387.079 kb on - strand, within AO356_01715 at 387.090 kb on + strand, within AO356_01715 at 387.091 kb on - strand, within AO356_01715 at 387.144 kb on + strand, within AO356_01715 at 387.145 kb on - strand, within AO356_01715 at 387.145 kb on - strand, within AO356_01715 at 387.160 kb on - strand, within AO356_01715 at 387.160 kb on - strand, within AO356_01715 at 387.161 kb on + strand, within AO356_01715 at 387.169 kb on - strand, within AO356_01715 at 387.282 kb on + strand, within AO356_01715 at 387.295 kb on - strand, within AO356_01715 at 387.410 kb on + strand, within AO356_01715 at 387.411 kb on - strand, within AO356_01715 at 387.411 kb on - strand, within AO356_01715 at 387.411 kb on - strand, within AO356_01715 at 387.411 kb on - strand, within AO356_01715 at 387.642 kb on + strand, within AO356_01715 at 387.642 kb on + strand, within AO356_01715 at 387.642 kb on + strand, within AO356_01715 at 387.642 kb on + strand, within AO356_01715 at 387.642 kb on + strand, within AO356_01715 at 387.643 kb on - strand, within AO356_01715 at 387.643 kb on - strand, within AO356_01715 at 387.643 kb on - strand, within AO356_01715 at 387.646 kb on + strand, within AO356_01715 at 387.646 kb on + strand, within AO356_01715 at 387.646 kb on + strand, within AO356_01715 at 387.646 kb on + strand, within AO356_01715 at 387.647 kb on - strand, within AO356_01715 at 387.647 kb on - strand, within AO356_01715 at 387.647 kb on - strand, within AO356_01715 at 387.681 kb on + strand at 387.765 kb on - strand at 387.807 kb on + strand at 387.807 kb on + strand at 387.807 kb on + strand at 387.852 kb on + strand at 387.853 kb on - strand at 387.853 kb on - strand at 387.861 kb on + strand at 387.893 kb on + strand at 387.893 kb on + strand at 387.893 kb on + strand at 387.893 kb on + strand at 387.893 kb on + strand at 387.894 kb on - strand at 387.894 kb on - strand at 387.894 kb on - strand at 387.894 kb on - strand at 387.912 kb on - strand at 387.947 kb on + strand at 387.947 kb on + strand at 387.947 kb on + strand at 387.948 kb on - strand at 387.958 kb on + strand at 387.958 kb on + strand at 387.958 kb on + strand at 387.958 kb on + strand at 387.992 kb on + strand at 387.999 kb on - strand at 388.471 kb on + strand, within AO356_01720 at 388.471 kb on + strand, within AO356_01720 at 388.471 kb on + strand, within AO356_01720 at 388.471 kb on + strand, within AO356_01720 at 388.472 kb on - strand, within AO356_01720 at 388.472 kb on - strand, within AO356_01720 at 388.472 kb on - strand, within AO356_01720 at 388.472 kb on - strand, within AO356_01720 at 388.472 kb on - strand, within AO356_01720 at 388.762 kb on + strand, within AO356_01720 at 388.763 kb on - strand, within AO356_01720 at 388.763 kb on - strand, within AO356_01720 at 388.822 kb on + strand, within AO356_01720 at 388.868 kb on - strand at 388.868 kb on - strand at 388.986 kb on + strand at 388.986 kb on + strand at 389.123 kb on + strand at 389.180 kb on + strand at 389.180 kb on + strand at 389.181 kb on - strand at 389.181 kb on - strand at 389.181 kb on - strand at 389.383 kb on - strand at 389.383 kb on - strand at 389.629 kb on + strand, within AO356_01725
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 387,078 + AO356_01715 0.32 +0.3 387,078 + AO356_01715 0.32 +1.6 387,079 - AO356_01715 0.32 +0.2 387,079 - AO356_01715 0.32 +0.1 387,090 + AO356_01715 0.33 -0.2 387,091 - AO356_01715 0.33 +0.6 387,144 + AO356_01715 0.38 +0.0 387,145 - AO356_01715 0.39 -0.1 387,145 - AO356_01715 0.39 -0.6 387,160 - AO356_01715 0.40 +1.7 387,160 - AO356_01715 0.40 +1.9 387,161 + AO356_01715 0.40 -0.3 387,169 - AO356_01715 0.41 +0.4 387,282 + AO356_01715 0.52 +1.7 387,295 - AO356_01715 0.53 -0.9 387,410 + AO356_01715 0.64 -0.6 387,411 - AO356_01715 0.64 +1.3 387,411 - AO356_01715 0.64 -1.2 387,411 - AO356_01715 0.64 +1.8 387,411 - AO356_01715 0.64 +0.1 387,642 + AO356_01715 0.86 +1.3 387,642 + AO356_01715 0.86 -0.3 387,642 + AO356_01715 0.86 +0.9 387,642 + AO356_01715 0.86 +0.3 387,642 + AO356_01715 0.86 +0.7 387,643 - AO356_01715 0.87 -0.8 387,643 - AO356_01715 0.87 -0.7 387,643 - AO356_01715 0.87 +2.2 387,646 + AO356_01715 0.87 -0.1 387,646 + AO356_01715 0.87 +0.1 387,646 + AO356_01715 0.87 +1.0 387,646 + AO356_01715 0.87 +0.0 387,647 - AO356_01715 0.87 +0.8 387,647 - AO356_01715 0.87 -1.5 387,647 - AO356_01715 0.87 -0.5 387,681 + +0.5 387,765 - -0.4 387,807 + +0.4 387,807 + +0.8 387,807 + +0.7 387,852 + +0.8 387,853 - -0.8 387,853 - -1.9 387,861 + -0.6 387,893 + -0.5 387,893 + +0.2 387,893 + -0.8 387,893 + -1.8 387,893 + -0.9 387,894 - -0.2 387,894 - -0.5 387,894 - -0.6 387,894 - +0.4 387,912 - +1.7 387,947 + +0.7 387,947 + +1.1 387,947 + -0.3 387,948 - -0.2 387,958 + -0.7 387,958 + -1.5 387,958 + -1.8 387,958 + +0.2 387,992 + -2.1 387,999 - +0.2 388,471 + AO356_01720 0.46 +0.6 388,471 + AO356_01720 0.46 +1.6 388,471 + AO356_01720 0.46 -0.4 388,471 + AO356_01720 0.46 +1.4 388,472 - AO356_01720 0.46 -0.0 388,472 - AO356_01720 0.46 -1.7 388,472 - AO356_01720 0.46 +0.7 388,472 - AO356_01720 0.46 -0.2 388,472 - AO356_01720 0.46 +0.8 388,762 + AO356_01720 0.78 +0.3 388,763 - AO356_01720 0.78 +1.6 388,763 - AO356_01720 0.78 +0.7 388,822 + AO356_01720 0.85 +0.4 388,868 - +0.8 388,868 - -1.7 388,986 + +0.6 388,986 + -1.0 389,123 + -1.6 389,180 + -1.9 389,180 + -1.0 389,181 - +1.2 389,181 - -0.3 389,181 - -1.0 389,383 - +1.1 389,383 - +0.7 389,629 + AO356_01725 0.18 +0.4
Or see this region's nucleotide sequence