Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00980 and AO356_00985 are separated by 5 nucleotides AO356_00985 and AO356_00990 are separated by 156 nucleotides AO356_00990 and AO356_00995 are separated by 247 nucleotides AO356_00995 and AO356_01000 are separated by 193 nucleotides
AO356_00980: AO356_00980 - DNA damage resistance protein <small>(from data)</small>, at 222,483 to 222,782
_00980
AO356_00985: AO356_00985 - deoxyribonuclease, at 222,788 to 223,477
_00985
AO356_00990: AO356_00990 - penicillin-binding protein activator LpoB, at 223,634 to 223,999
_00990
AO356_00995: AO356_00995 - carbon storage regulator CsrA, at 224,247 to 224,441
_00995
AO356_01000: AO356_01000 - hypothetical protein, at 224,635 to 225,090
_01000
Position (kb) 223
224 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 222.805 kb on - strand at 222.893 kb on + strand, within AO356_00985 at 222.893 kb on + strand, within AO356_00985 at 222.893 kb on + strand, within AO356_00985 at 222.893 kb on + strand, within AO356_00985 at 222.894 kb on - strand, within AO356_00985 at 222.894 kb on - strand, within AO356_00985 at 222.894 kb on - strand, within AO356_00985 at 222.894 kb on - strand, within AO356_00985 at 222.917 kb on + strand, within AO356_00985 at 222.918 kb on - strand, within AO356_00985 at 222.928 kb on + strand, within AO356_00985 at 222.928 kb on + strand, within AO356_00985 at 222.929 kb on - strand, within AO356_00985 at 222.932 kb on + strand, within AO356_00985 at 222.933 kb on - strand, within AO356_00985 at 222.972 kb on + strand, within AO356_00985 at 222.972 kb on + strand, within AO356_00985 at 223.018 kb on + strand, within AO356_00985 at 223.018 kb on + strand, within AO356_00985 at 223.018 kb on + strand, within AO356_00985 at 223.018 kb on + strand, within AO356_00985 at 223.018 kb on + strand, within AO356_00985 at 223.019 kb on - strand, within AO356_00985 at 223.019 kb on - strand, within AO356_00985 at 223.019 kb on - strand, within AO356_00985 at 223.103 kb on + strand, within AO356_00985 at 223.103 kb on + strand, within AO356_00985 at 223.104 kb on - strand, within AO356_00985 at 223.104 kb on - strand, within AO356_00985 at 223.295 kb on + strand, within AO356_00985 at 223.295 kb on + strand, within AO356_00985 at 223.295 kb on + strand, within AO356_00985 at 223.301 kb on + strand, within AO356_00985 at 223.302 kb on - strand, within AO356_00985 at 223.317 kb on - strand, within AO356_00985 at 223.352 kb on + strand, within AO356_00985 at 223.352 kb on + strand, within AO356_00985 at 223.352 kb on + strand, within AO356_00985 at 223.352 kb on + strand, within AO356_00985 at 223.352 kb on + strand, within AO356_00985 at 223.373 kb on + strand, within AO356_00985 at 223.635 kb on + strand at 223.636 kb on - strand at 223.651 kb on - strand at 223.787 kb on + strand, within AO356_00990 at 223.787 kb on + strand, within AO356_00990 at 223.788 kb on - strand, within AO356_00990 at 223.788 kb on - strand, within AO356_00990 at 223.788 kb on - strand, within AO356_00990 at 223.993 kb on + strand at 223.993 kb on + strand at 223.994 kb on - strand at 224.034 kb on + strand at 224.035 kb on - strand at 224.035 kb on - strand at 224.103 kb on + strand at 224.103 kb on + strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.104 kb on - strand at 224.105 kb on + strand at 224.123 kb on + strand at 224.123 kb on + strand at 224.123 kb on + strand at 224.123 kb on + strand at 224.124 kb on - strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.170 kb on + strand at 224.171 kb on - strand at 224.171 kb on - strand at 224.171 kb on - strand at 224.171 kb on - strand at 224.176 kb on + strand at 224.177 kb on - strand at 224.177 kb on - strand at 224.177 kb on - strand at 224.181 kb on + strand at 224.181 kb on + strand at 224.181 kb on + strand at 224.182 kb on - strand at 224.182 kb on - strand at 224.183 kb on + strand at 224.183 kb on + strand at 224.183 kb on + strand at 224.183 kb on + strand at 224.224 kb on - strand at 224.225 kb on + strand at 224.255 kb on - strand at 224.282 kb on - strand, within AO356_00995 at 224.285 kb on + strand, within AO356_00995 at 224.285 kb on + strand, within AO356_00995 at 224.286 kb on - strand, within AO356_00995 at 224.335 kb on + strand, within AO356_00995 at 224.335 kb on + strand, within AO356_00995 at 224.388 kb on + strand, within AO356_00995 at 224.388 kb on + strand, within AO356_00995 at 224.388 kb on + strand, within AO356_00995 at 224.388 kb on + strand, within AO356_00995 at 224.388 kb on + strand, within AO356_00995 at 224.560 kb on + strand at 224.560 kb on + strand at 224.561 kb on - strand at 224.561 kb on - strand at 224.563 kb on + strand at 224.563 kb on + strand at 224.604 kb on + strand at 224.605 kb on - strand at 224.605 kb on - strand at 224.693 kb on - strand, within AO356_01000 at 224.809 kb on + strand, within AO356_01000 at 224.867 kb on + strand, within AO356_01000 at 224.867 kb on + strand, within AO356_01000 at 224.867 kb on + strand, within AO356_01000 at 224.867 kb on + strand, within AO356_01000 at 224.871 kb on - strand, within AO356_01000 at 224.871 kb on - strand, within AO356_01000 at 224.871 kb on - strand, within AO356_01000
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 222,805 - -0.1 222,893 + AO356_00985 0.15 +1.5 222,893 + AO356_00985 0.15 -0.8 222,893 + AO356_00985 0.15 -1.4 222,893 + AO356_00985 0.15 -3.1 222,894 - AO356_00985 0.15 -0.2 222,894 - AO356_00985 0.15 +0.5 222,894 - AO356_00985 0.15 -1.0 222,894 - AO356_00985 0.15 +1.5 222,917 + AO356_00985 0.19 -1.3 222,918 - AO356_00985 0.19 +0.9 222,928 + AO356_00985 0.20 +0.1 222,928 + AO356_00985 0.20 -0.5 222,929 - AO356_00985 0.20 -1.2 222,932 + AO356_00985 0.21 +0.3 222,933 - AO356_00985 0.21 -0.1 222,972 + AO356_00985 0.27 -0.9 222,972 + AO356_00985 0.27 -1.6 223,018 + AO356_00985 0.33 -0.2 223,018 + AO356_00985 0.33 -0.6 223,018 + AO356_00985 0.33 -0.3 223,018 + AO356_00985 0.33 +0.9 223,018 + AO356_00985 0.33 -0.7 223,019 - AO356_00985 0.33 +0.3 223,019 - AO356_00985 0.33 +0.1 223,019 - AO356_00985 0.33 +0.2 223,103 + AO356_00985 0.46 -0.0 223,103 + AO356_00985 0.46 -0.6 223,104 - AO356_00985 0.46 +0.2 223,104 - AO356_00985 0.46 -1.4 223,295 + AO356_00985 0.73 -1.1 223,295 + AO356_00985 0.73 -1.0 223,295 + AO356_00985 0.73 -0.0 223,301 + AO356_00985 0.74 -1.2 223,302 - AO356_00985 0.74 -0.6 223,317 - AO356_00985 0.77 -1.5 223,352 + AO356_00985 0.82 -0.4 223,352 + AO356_00985 0.82 -0.6 223,352 + AO356_00985 0.82 +0.5 223,352 + AO356_00985 0.82 +0.1 223,352 + AO356_00985 0.82 -0.4 223,373 + AO356_00985 0.85 -0.6 223,635 + +0.4 223,636 - -0.7 223,651 - -1.2 223,787 + AO356_00990 0.42 +0.7 223,787 + AO356_00990 0.42 -1.8 223,788 - AO356_00990 0.42 -2.6 223,788 - AO356_00990 0.42 -0.9 223,788 - AO356_00990 0.42 -0.9 223,993 + +0.5 223,993 + +0.4 223,994 - +0.0 224,034 + +1.4 224,035 - -3.8 224,035 - -2.4 224,103 + +0.4 224,103 + +0.7 224,104 - +1.7 224,104 - -2.1 224,104 - -1.8 224,104 - -0.4 224,104 - +0.4 224,104 - -2.7 224,104 - -1.8 224,105 + +0.0 224,123 + +0.3 224,123 + +1.9 224,123 + +0.9 224,123 + -0.1 224,124 - +0.4 224,170 + +0.7 224,170 + +0.3 224,170 + +0.8 224,170 + +1.6 224,170 + +0.7 224,170 + +0.7 224,170 + +0.9 224,171 - -1.1 224,171 - -1.2 224,171 - -2.2 224,171 - -2.2 224,176 + -0.1 224,177 - -1.6 224,177 - -0.7 224,177 - -1.3 224,181 + +0.1 224,181 + -0.5 224,181 + +0.6 224,182 - -1.5 224,182 - -0.4 224,183 + +0.3 224,183 + +0.1 224,183 + +1.1 224,183 + +0.8 224,224 - -3.1 224,225 + +0.8 224,255 - -1.3 224,282 - AO356_00995 0.18 -1.0 224,285 + AO356_00995 0.19 -1.3 224,285 + AO356_00995 0.19 -0.3 224,286 - AO356_00995 0.20 -2.6 224,335 + AO356_00995 0.45 -1.9 224,335 + AO356_00995 0.45 -2.7 224,388 + AO356_00995 0.72 -3.0 224,388 + AO356_00995 0.72 -1.2 224,388 + AO356_00995 0.72 -0.8 224,388 + AO356_00995 0.72 -3.3 224,388 + AO356_00995 0.72 -1.1 224,560 + -1.2 224,560 + -0.9 224,561 - -0.3 224,561 - -2.1 224,563 + -0.5 224,563 + -1.8 224,604 + +2.0 224,605 - -1.1 224,605 - -0.3 224,693 - AO356_01000 0.13 +0.1 224,809 + AO356_01000 0.38 -2.5 224,867 + AO356_01000 0.51 +1.0 224,867 + AO356_01000 0.51 +0.1 224,867 + AO356_01000 0.51 +1.5 224,867 + AO356_01000 0.51 -0.1 224,871 - AO356_01000 0.52 -0.8 224,871 - AO356_01000 0.52 +1.4 224,871 - AO356_01000 0.52 -1.0
Or see this region's nucleotide sequence