Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3041
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
3,837,429 | + | -2.7 | |||
3,837,491 | + | -0.8 | |||
3,837,499 | - | -0.8 | |||
3,837,499 | - | -3.2 | |||
3,837,546 | - | -2.6 | |||
3,837,670 | - | -0.9 | |||
3,837,943 | - | -0.3 | |||
3,838,586 | + | DvMF_3041 | 0.53 | -2.0 | |
3,838,594 | - | DvMF_3041 | 0.54 | -1.2 | |
3,839,067 | - | DvMF_3042 | 0.13 | -0.6 | |
3,839,307 | - | DvMF_3042 | 0.38 | -3.8 | |
3,839,601 | + | DvMF_3042 | 0.68 | -0.8 | |
3,839,609 | - | DvMF_3042 | 0.69 | -2.4 | |
3,839,691 | - | DvMF_3042 | 0.78 | -0.8 | |
3,839,765 | - | DvMF_3042 | 0.85 | -4.6 |
Or see this region's nucleotide sequence