Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2952
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
3,723,500 | - | DvMF_2951 | 0.20 | -1.9 | |
3,723,607 | + | DvMF_2951 | 0.36 | -0.3 | |
3,723,615 | - | DvMF_2951 | 0.38 | +0.4 | |
3,723,912 | + | DvMF_2951 | 0.84 | -0.8 | |
3,724,013 | - | -4.2 | |||
3,724,013 | - | -0.6 | |||
3,724,079 | + | -3.1 | |||
3,724,120 | - | +0.9 | |||
3,724,163 | - | +0.5 | |||
3,724,644 | - | DvMF_2952 | 0.50 | +0.9 | |
3,724,688 | + | DvMF_2952 | 0.58 | +0.2 | |
3,724,754 | - | DvMF_2952 | 0.68 | -1.0 | |
3,724,758 | - | DvMF_2952 | 0.69 | -0.7 | |
3,724,991 | + | -0.6 | |||
3,725,012 | + | -2.1 | |||
3,725,012 | + | -1.0 | |||
3,725,056 | - | +0.3 | |||
3,725,056 | - | +0.2 | |||
3,725,088 | + | -0.8 | |||
3,725,286 | + | DvMF_2953 | 0.12 | -1.5 | |
3,725,525 | - | DvMF_2953 | 0.32 | -0.4 | |
3,725,883 | + | DvMF_2953 | 0.61 | -1.7 |
Or see this region's nucleotide sequence