Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2858
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
3,609,050 | + | +1.4 | |||
3,609,336 | + | DvMF_2857 | 0.37 | -0.3 | |
3,609,366 | + | DvMF_2857 | 0.41 | -1.0 | |
3,609,366 | + | DvMF_2857 | 0.41 | -0.7 | |
3,609,371 | + | DvMF_2857 | 0.41 | +0.1 | |
3,609,550 | - | DvMF_2857 | 0.63 | -3.2 | |
3,609,925 | + | -0.6 | |||
3,610,007 | + | -0.6 | |||
3,610,136 | - | DvMF_2858 | 0.24 | -1.1 | |
3,610,219 | + | DvMF_2858 | 0.35 | -0.9 | |
3,610,414 | - | DvMF_2858 | 0.61 | -1.8 | |
3,610,469 | - | DvMF_2858 | 0.69 | +0.4 | |
3,610,504 | - | DvMF_2858 | 0.74 | +1.2 | |
3,610,728 | - | -2.8 | |||
3,610,770 | - | -1.2 | |||
3,611,437 | - | DvMF_2859 | 0.71 | +1.5 |
Or see this region's nucleotide sequence