Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2846
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
3,595,932 | - | DvMF_2845 | 0.70 | +1.3 | |
3,596,075 | + | DvMF_2845 | 0.77 | +0.0 | |
3,596,082 | + | DvMF_2845 | 0.77 | -0.5 | |
3,596,083 | - | DvMF_2845 | 0.77 | -1.1 | |
3,596,083 | - | DvMF_2845 | 0.77 | -2.9 | |
3,596,083 | - | DvMF_2845 | 0.77 | -0.4 | |
3,596,083 | - | DvMF_2845 | 0.77 | -0.3 | |
3,596,083 | - | DvMF_2845 | 0.77 | -0.6 | |
3,596,153 | + | DvMF_2845 | 0.80 | -3.6 | |
3,596,153 | + | DvMF_2845 | 0.80 | -1.1 | |
3,596,156 | - | DvMF_2845 | 0.80 | -0.7 | |
3,596,256 | + | DvMF_2845 | 0.85 | -1.4 | |
3,596,347 | + | DvMF_2845 | 0.89 | -0.7 | |
3,596,511 | + | -0.6 | |||
3,598,546 | + | -1.1 | |||
3,598,610 | + | -1.1 | |||
3,598,955 | - | DvMF_2847 | 0.16 | -0.7 | |
3,598,992 | - | DvMF_2847 | 0.19 | -0.3 | |
3,599,177 | + | DvMF_2847 | 0.32 | -1.6 | |
3,599,177 | + | DvMF_2847 | 0.32 | -0.9 | |
3,599,185 | - | DvMF_2847 | 0.32 | -0.3 | |
3,599,301 | + | DvMF_2847 | 0.40 | -1.1 |
Or see this region's nucleotide sequence