Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2663 and DvMF_2664 are separated by 664 nucleotides DvMF_2664 and DvMF_2665 are separated by 129 nucleotides
DvMF_2663: DvMF_2663 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,363,574 to 3,365,157
_2663
DvMF_2664: DvMF_2664 - PDZ/DHR/GLGF domain protein (RefSeq), at 3,365,822 to 3,367,024
_2664
DvMF_2665: DvMF_2665 - hypothetical protein (RefSeq), at 3,367,154 to 3,368,788
_2665
Position (kb)
3365
3366
3367
3368 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3365.080 kb on - strand at 3365.152 kb on + strand at 3365.152 kb on + strand at 3365.236 kb on + strand at 3365.334 kb on - strand at 3365.334 kb on - strand at 3365.369 kb on - strand at 3365.435 kb on - strand at 3365.814 kb on + strand at 3366.051 kb on + strand, within DvMF_2664 at 3366.057 kb on - strand, within DvMF_2664 at 3366.168 kb on - strand, within DvMF_2664 at 3366.255 kb on - strand, within DvMF_2664 at 3366.406 kb on + strand, within DvMF_2664 at 3366.414 kb on - strand, within DvMF_2664 at 3366.414 kb on - strand, within DvMF_2664 at 3366.483 kb on + strand, within DvMF_2664 at 3366.667 kb on + strand, within DvMF_2664 at 3366.675 kb on - strand, within DvMF_2664 at 3366.738 kb on + strand, within DvMF_2664 at 3366.811 kb on - strand, within DvMF_2664 at 3366.816 kb on - strand, within DvMF_2664 at 3366.846 kb on - strand, within DvMF_2664 at 3367.070 kb on - strand at 3367.431 kb on + strand, within DvMF_2665 at 3367.953 kb on - strand, within DvMF_2665 at 3367.953 kb on - strand, within DvMF_2665
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.031 % remove 3,365,080 - -1.8 3,365,152 + -0.7 3,365,152 + -0.5 3,365,236 + -0.1 3,365,334 - -0.8 3,365,334 - -4.2 3,365,369 - -0.5 3,365,435 - -0.6 3,365,814 + -2.0 3,366,051 + DvMF_2664 0.19 +0.2 3,366,057 - DvMF_2664 0.20 +0.1 3,366,168 - DvMF_2664 0.29 +0.0 3,366,255 - DvMF_2664 0.36 -0.9 3,366,406 + DvMF_2664 0.49 -0.7 3,366,414 - DvMF_2664 0.49 -0.4 3,366,414 - DvMF_2664 0.49 -0.9 3,366,483 + DvMF_2664 0.55 -5.3 3,366,667 + DvMF_2664 0.70 -0.8 3,366,675 - DvMF_2664 0.71 -0.6 3,366,738 + DvMF_2664 0.76 -1.0 3,366,811 - DvMF_2664 0.82 +0.1 3,366,816 - DvMF_2664 0.83 -1.1 3,366,846 - DvMF_2664 0.85 -0.6 3,367,070 - -1.8 3,367,431 + DvMF_2665 0.17 -2.3 3,367,953 - DvMF_2665 0.49 -1.1 3,367,953 - DvMF_2665 0.49 -1.5
Or see this region's nucleotide sequence