Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2393
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
3,024,366 | + | DvMF_2391 | 0.56 | -0.7 | |
3,024,366 | + | DvMF_2391 | 0.56 | -0.8 | |
3,024,374 | - | DvMF_2391 | 0.58 | -1.1 | |
3,024,622 | + | -0.1 | |||
3,024,915 | - | DvMF_2392 | 0.76 | -0.6 | |
3,024,954 | + | DvMF_2392 | 0.87 | -0.2 | |
3,025,059 | + | -0.4 | |||
3,025,067 | - | +0.1 | |||
3,025,204 | + | -0.5 | |||
3,025,235 | + | DvMF_2393 | 0.10 | -1.4 | |
3,025,243 | - | DvMF_2393 | 0.11 | +0.5 | |
3,025,470 | - | DvMF_2393 | 0.40 | -4.0 | |
3,025,470 | - | DvMF_2393 | 0.40 | -0.2 | |
3,025,613 | + | DvMF_2393 | 0.59 | -3.3 | |
3,025,950 | + | +0.4 | |||
3,026,006 | + | -0.1 | |||
3,026,079 | - | -0.6 | |||
3,026,403 | + | -0.4 | |||
3,026,439 | - | -0.2 | |||
3,026,564 | - | DvMF_2394 | 0.17 | -3.0 | |
3,026,581 | + | DvMF_2394 | 0.22 | -1.0 | |
3,026,581 | + | DvMF_2394 | 0.22 | -2.2 | |
3,026,581 | + | DvMF_2394 | 0.22 | -0.2 | |
3,026,716 | - | DvMF_2394 | 0.60 | -1.7 |
Or see this region's nucleotide sequence