Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2260
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
2,838,549 | - | -0.6 | |||
2,838,666 | - | DvMF_2259 | 0.17 | +0.8 | |
2,838,740 | + | DvMF_2259 | 0.26 | -1.8 | |
2,838,810 | + | DvMF_2259 | 0.35 | -0.2 | |
2,838,994 | + | DvMF_2259 | 0.57 | -0.2 | |
2,839,052 | + | DvMF_2259 | 0.64 | -0.3 | |
2,839,052 | - | DvMF_2259 | 0.64 | -0.1 | |
2,839,179 | + | DvMF_2259 | 0.79 | -1.9 | |
2,839,187 | - | DvMF_2259 | 0.80 | -1.2 | |
2,839,187 | - | DvMF_2259 | 0.80 | +0.0 | |
2,839,384 | + | -2.0 | |||
2,839,416 | + | +0.1 | |||
2,839,417 | + | -0.9 | |||
2,839,474 | - | DvMF_2260 | 0.16 | -4.9 | |
2,839,576 | - | DvMF_2260 | 0.29 | -1.6 | |
2,839,605 | - | DvMF_2260 | 0.33 | +0.0 | |
2,839,615 | - | DvMF_2260 | 0.34 | -0.5 | |
2,839,619 | - | DvMF_2260 | 0.35 | +0.4 | |
2,839,619 | - | DvMF_2260 | 0.35 | -0.8 | |
2,839,851 | - | DvMF_2260 | 0.65 | -2.6 | |
2,839,860 | + | DvMF_2260 | 0.66 | -1.5 | |
2,839,901 | - | DvMF_2260 | 0.71 | -0.4 | |
2,839,927 | + | DvMF_2260 | 0.74 | -0.9 | |
2,840,029 | - | DvMF_2260 | 0.88 | -1.3 | |
2,840,233 | + | DvMF_2261 | 0.11 | +0.4 | |
2,840,509 | - | DvMF_2261 | 0.36 | +0.9 | |
2,840,811 | + | DvMF_2261 | 0.64 | -0.7 | |
2,840,843 | + | DvMF_2261 | 0.67 | -0.8 | |
2,840,993 | - | DvMF_2261 | 0.81 | -2.4 |
Or see this region's nucleotide sequence