Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1995 and DvMF_1996 are separated by 303 nucleotides DvMF_1996 and DvMF_1997 are separated by 350 nucleotides
DvMF_1995: DvMF_1995 - Malate/L-lactate dehydrogenase (RefSeq), at 2,472,315 to 2,473,385
_1995
DvMF_1996: DvMF_1996 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,473,689 to 2,475,722
_1996
DvMF_1997: DvMF_1997 - hypothetical protein (RefSeq), at 2,476,073 to 2,477,323
_1997
Position (kb)
2473
2474
2475
2476 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2472.799 kb on + strand, within DvMF_1995 at 2472.822 kb on - strand, within DvMF_1995 at 2473.094 kb on + strand, within DvMF_1995 at 2473.263 kb on + strand, within DvMF_1995 at 2473.263 kb on - strand, within DvMF_1995 at 2473.374 kb on - strand at 2473.531 kb on - strand at 2473.609 kb on + strand at 2473.617 kb on - strand at 2473.870 kb on + strand at 2474.292 kb on + strand, within DvMF_1996 at 2474.380 kb on - strand, within DvMF_1996 at 2474.702 kb on - strand, within DvMF_1996 at 2474.820 kb on + strand, within DvMF_1996 at 2474.853 kb on + strand, within DvMF_1996 at 2475.195 kb on + strand, within DvMF_1996 at 2475.728 kb on - strand at 2475.751 kb on + strand at 2475.761 kb on - strand at 2475.906 kb on + strand at 2475.909 kb on - strand at 2475.914 kb on - strand at 2476.143 kb on + strand at 2476.351 kb on + strand, within DvMF_1997 at 2476.423 kb on + strand, within DvMF_1997 at 2476.428 kb on + strand, within DvMF_1997 at 2476.433 kb on + strand, within DvMF_1997 at 2476.621 kb on - strand, within DvMF_1997 at 2476.683 kb on + strand, within DvMF_1997 at 2476.691 kb on - strand, within DvMF_1997
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.031 % remove 2,472,799 + DvMF_1995 0.45 -0.6 2,472,822 - DvMF_1995 0.47 +0.1 2,473,094 + DvMF_1995 0.73 +0.3 2,473,263 + DvMF_1995 0.89 -0.3 2,473,263 - DvMF_1995 0.89 -2.2 2,473,374 - -0.5 2,473,531 - -0.8 2,473,609 + -0.5 2,473,617 - -1.7 2,473,870 + -1.1 2,474,292 + DvMF_1996 0.30 -0.6 2,474,380 - DvMF_1996 0.34 -2.2 2,474,702 - DvMF_1996 0.50 -1.5 2,474,820 + DvMF_1996 0.56 -3.5 2,474,853 + DvMF_1996 0.57 -0.6 2,475,195 + DvMF_1996 0.74 +0.3 2,475,728 - +0.0 2,475,751 + -3.4 2,475,761 - -0.4 2,475,906 + -0.7 2,475,909 - -0.6 2,475,914 - -0.1 2,476,143 + +0.1 2,476,351 + DvMF_1997 0.22 +1.2 2,476,423 + DvMF_1997 0.28 +0.2 2,476,428 + DvMF_1997 0.28 -0.1 2,476,433 + DvMF_1997 0.29 -0.2 2,476,621 - DvMF_1997 0.44 -1.7 2,476,683 + DvMF_1997 0.49 -0.8 2,476,691 - DvMF_1997 0.49 -0.9
Or see this region's nucleotide sequence