Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1831
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
2,234,667 | - | DvMF_1830 | 0.81 | -1.1 | |
2,234,670 | + | DvMF_1830 | 0.82 | -1.6 | |
2,234,681 | + | DvMF_1830 | 0.83 | -3.3 | |
2,234,706 | - | DvMF_1830 | 0.85 | -1.2 | |
2,234,760 | - | -1.4 | |||
2,234,882 | + | -0.5 | |||
2,234,926 | + | +0.0 | |||
2,234,974 | - | -0.6 | |||
2,234,979 | - | -0.5 | |||
2,235,165 | - | +0.9 | |||
2,235,172 | + | -0.9 | |||
2,235,349 | + | -1.2 | |||
2,235,357 | - | +2.5 | |||
2,235,357 | - | -3.5 | |||
2,235,599 | - | DvMF_1831 | 0.40 | -1.4 | |
2,235,687 | + | DvMF_1831 | 0.54 | -0.1 | |
2,235,725 | - | DvMF_1831 | 0.59 | -1.0 | |
2,235,843 | + | DvMF_1831 | 0.77 | -0.8 | |
2,235,846 | - | DvMF_1831 | 0.78 | -0.3 | |
2,235,995 | - | -0.0 | |||
2,236,205 | + | DvMF_1832 | 0.18 | -0.3 | |
2,236,255 | + | DvMF_1832 | 0.22 | -1.5 | |
2,236,359 | + | DvMF_1832 | 0.31 | -2.7 | |
2,236,402 | - | DvMF_1832 | 0.35 | -0.4 | |
2,236,423 | - | DvMF_1832 | 0.37 | -3.4 | |
2,236,625 | - | DvMF_1832 | 0.54 | +0.1 | |
2,236,668 | - | DvMF_1832 | 0.57 | -2.0 | |
2,236,725 | - | DvMF_1832 | 0.62 | -0.7 | |
2,236,786 | - | DvMF_1832 | 0.67 | -0.7 | |
2,236,800 | - | DvMF_1832 | 0.68 | -1.2 | |
2,236,840 | - | DvMF_1832 | 0.72 | -1.0 | |
2,236,853 | - | DvMF_1832 | 0.73 | +0.1 |
Or see this region's nucleotide sequence