Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1814
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
2,214,920 | - | -1.6 | |||
2,214,930 | - | -0.4 | |||
2,215,092 | - | +0.2 | |||
2,215,214 | - | -0.6 | |||
2,215,236 | - | -0.1 | |||
2,215,283 | - | DvMF_1813 | 0.17 | -0.2 | |
2,215,315 | + | DvMF_1813 | 0.22 | -0.1 | |
2,215,371 | + | DvMF_1813 | 0.31 | -0.6 | |
2,215,628 | - | DvMF_1813 | 0.71 | -0.8 | |
2,215,630 | + | DvMF_1813 | 0.72 | -0.5 | |
2,215,832 | - | -2.2 | |||
2,215,902 | - | -0.4 | |||
2,216,090 | - | -1.6 | |||
2,216,156 | - | -0.8 | |||
2,216,184 | - | -0.5 | |||
2,216,309 | - | -1.2 | |||
2,216,507 | + | -0.3 | |||
2,216,547 | - | DvMF_1815 | 0.14 | -2.1 | |
2,216,714 | + | DvMF_1815 | 0.74 | -1.0 | |
2,216,722 | - | DvMF_1815 | 0.77 | -0.2 | |
2,216,740 | + | DvMF_1815 | 0.83 | -0.5 | |
2,216,749 | + | DvMF_1815 | 0.86 | -0.9 | |
2,216,766 | + | -0.4 | |||
2,217,000 | - | -0.2 | |||
2,217,073 | - | DvMF_1816 | 0.22 | -1.8 |
Or see this region's nucleotide sequence