Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1481
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
1,814,195 | + | DvMF_1479 | 0.82 | -1.9 | |
1,814,314 | + | -0.9 | |||
1,814,658 | - | DvMF_1480 | 0.39 | -0.4 | |
1,814,708 | + | DvMF_1480 | 0.44 | -0.7 | |
1,815,001 | - | DvMF_1480 | 0.79 | -0.9 | |
1,815,039 | + | DvMF_1480 | 0.84 | -0.7 | |
1,815,205 | - | -0.9 | |||
1,815,218 | + | -0.5 | |||
1,815,218 | + | -0.6 | |||
1,815,365 | + | DvMF_1481 | 0.25 | -0.2 | |
1,815,492 | - | DvMF_1481 | 0.42 | -0.5 | |
1,815,612 | - | DvMF_1481 | 0.57 | -0.4 | |
1,815,646 | + | DvMF_1481 | 0.61 | -4.3 | |
1,815,690 | + | DvMF_1481 | 0.67 | -0.6 | |
1,815,813 | - | DvMF_1481 | 0.83 | -0.7 | |
1,815,859 | + | DvMF_1481 | 0.89 | -0.8 | |
1,816,159 | + | DvMF_1482 | 0.20 | -1.3 | |
1,816,318 | - | DvMF_1482 | 0.35 | -3.8 | |
1,816,349 | - | DvMF_1482 | 0.37 | -0.5 | |
1,816,422 | + | DvMF_1482 | 0.44 | -0.0 | |
1,816,482 | + | DvMF_1482 | 0.50 | -0.9 | |
1,816,596 | + | DvMF_1482 | 0.60 | -3.9 | |
1,816,704 | - | DvMF_1482 | 0.70 | -1.7 | |
1,816,798 | + | DvMF_1482 | 0.79 | -0.9 | |
1,816,943 | + | -2.1 |
Or see this region's nucleotide sequence