Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1347
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
|---|---|---|---|---|---|
| remove | |||||
| 1,643,276 | - | DvMF_1346 | 0.74 | -0.8 | |
| 1,643,370 | + | DvMF_1346 | 0.77 | -1.3 | |
| 1,643,445 | - | DvMF_1346 | 0.80 | -0.3 | |
| 1,643,450 | + | DvMF_1346 | 0.80 | -0.9 | |
| 1,643,472 | + | DvMF_1346 | 0.81 | -1.0 | |
| 1,643,741 | + | DvMF_1346 | 0.90 | +1.1 | |
| 1,643,749 | - | DvMF_1346 | 0.90 | -0.2 | |
| 1,643,749 | - | DvMF_1346 | 0.90 | -1.1 | |
| 1,643,756 | + | +0.3 | |||
| 1,643,764 | - | -0.5 | |||
| 1,643,764 | - | -0.4 | |||
| 1,644,095 | + | -1.1 | |||
| 1,644,167 | + | +0.5 | |||
| 1,644,436 | + | DvMF_1347 | 0.34 | -4.3 | |
| 1,644,615 | + | DvMF_1347 | 0.65 | -2.4 | |
| 1,644,880 | + | -0.8 | |||
| 1,644,918 | - | -0.2 | |||
| 1,644,971 | + | -0.8 | |||
| 1,644,972 | - | -0.7 | |||
| 1,644,979 | - | -0.5 | |||
| 1,644,979 | - | -0.0 |
Or see this region's nucleotide sequence