Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1146
Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.031 % |
---|---|---|---|---|---|
remove | |||||
1,403,783 | + | +0.2 | |||
1,403,815 | - | -0.1 | |||
1,403,829 | - | -0.5 | |||
1,403,835 | - | -0.5 | |||
1,403,948 | + | DvMF_1144 | 0.57 | -1.1 | |
1,403,948 | + | DvMF_1144 | 0.57 | -0.1 | |
1,403,976 | + | DvMF_1144 | 0.70 | -0.6 | |
1,404,095 | + | DvMF_1145 | 0.32 | -1.1 | |
1,404,555 | + | -0.4 | |||
1,404,563 | - | -1.0 | |||
1,404,676 | + | +1.6 | |||
1,404,803 | - | -0.4 | |||
1,404,854 | + | DvMF_1146 | 0.14 | -0.5 | |
1,405,166 | + | DvMF_1146 | 0.59 | -1.0 | |
1,405,263 | - | DvMF_1146 | 0.73 | -0.7 | |
1,405,374 | - | DvMF_1146 | 0.89 | -3.5 | |
1,405,407 | + | -0.1 | |||
1,405,414 | + | +0.1 | |||
1,405,414 | + | -2.5 | |||
1,405,414 | + | -0.9 | |||
1,405,422 | - | -0.3 | |||
1,405,422 | - | -3.4 | |||
1,405,748 | + | +0.4 | |||
1,405,820 | + | +0.4 | |||
1,405,875 | + | -0.8 | |||
1,405,933 | + | -1.3 | |||
1,405,941 | - | -0.0 | |||
1,406,094 | - | -1.1 | |||
1,406,414 | + | -2.8 |
Or see this region's nucleotide sequence