Experiment: MoYLS4 with methylglyoxal 0.031 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0635 and DvMF_0636 overlap by 4 nucleotides DvMF_0636 and DvMF_0637 overlap by 4 nucleotides
DvMF_0635: DvMF_0635 - protein of unknown function DUF182 (RefSeq), at 758,152 to 759,240
_0635
DvMF_0636: DvMF_0636 - coenzyme F390 synthetase-like protein (RefSeq), at 759,237 to 760,457
_0636
DvMF_0637: DvMF_0637 - Radical SAM domain protein (RefSeq), at 760,454 to 762,220
_0637
Position (kb) 759
760
761 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 758.237 kb on - strand at 758.393 kb on + strand, within DvMF_0635 at 758.403 kb on + strand, within DvMF_0635 at 758.442 kb on + strand, within DvMF_0635 at 758.450 kb on - strand, within DvMF_0635 at 759.003 kb on + strand, within DvMF_0635 at 759.030 kb on - strand, within DvMF_0635 at 759.092 kb on - strand, within DvMF_0635 at 759.260 kb on + strand at 759.260 kb on + strand at 759.308 kb on - strand at 759.490 kb on - strand, within DvMF_0636 at 759.506 kb on + strand, within DvMF_0636 at 759.581 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.665 kb on + strand, within DvMF_0636 at 759.704 kb on - strand, within DvMF_0636 at 759.920 kb on + strand, within DvMF_0636 at 759.920 kb on + strand, within DvMF_0636 at 760.200 kb on - strand, within DvMF_0636 at 760.336 kb on + strand at 760.529 kb on + strand at 760.537 kb on - strand at 760.537 kb on - strand at 760.579 kb on - strand at 760.725 kb on + strand, within DvMF_0637 at 760.762 kb on - strand, within DvMF_0637 at 760.779 kb on - strand, within DvMF_0637 at 761.133 kb on + strand, within DvMF_0637 at 761.141 kb on - strand, within DvMF_0637 at 761.155 kb on - strand, within DvMF_0637 at 761.157 kb on + strand, within DvMF_0637 at 761.209 kb on + strand, within DvMF_0637 at 761.214 kb on - strand, within DvMF_0637
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.031 % remove 758,237 - -2.3 758,393 + DvMF_0635 0.22 -1.6 758,403 + DvMF_0635 0.23 -1.2 758,442 + DvMF_0635 0.27 -3.7 758,450 - DvMF_0635 0.27 -0.2 759,003 + DvMF_0635 0.78 -6.1 759,030 - DvMF_0635 0.81 +1.3 759,092 - DvMF_0635 0.86 -0.8 759,260 + -3.2 759,260 + -1.1 759,308 - -1.0 759,490 - DvMF_0636 0.21 -0.2 759,506 + DvMF_0636 0.22 -3.4 759,581 + DvMF_0636 0.28 -0.7 759,588 + DvMF_0636 0.29 -3.2 759,588 + DvMF_0636 0.29 -0.0 759,588 + DvMF_0636 0.29 -0.6 759,588 + DvMF_0636 0.29 -0.5 759,596 - DvMF_0636 0.29 -0.5 759,596 - DvMF_0636 0.29 -0.4 759,596 - DvMF_0636 0.29 +0.3 759,596 - DvMF_0636 0.29 +0.3 759,665 + DvMF_0636 0.35 -2.5 759,704 - DvMF_0636 0.38 -3.2 759,920 + DvMF_0636 0.56 +0.6 759,920 + DvMF_0636 0.56 -2.8 760,200 - DvMF_0636 0.79 -3.4 760,336 + -0.6 760,529 + -1.2 760,537 - -1.1 760,537 - +0.2 760,579 - -0.7 760,725 + DvMF_0637 0.15 -0.5 760,762 - DvMF_0637 0.17 -2.3 760,779 - DvMF_0637 0.18 -0.3 761,133 + DvMF_0637 0.38 -2.1 761,141 - DvMF_0637 0.39 -0.3 761,155 - DvMF_0637 0.40 -2.4 761,157 + DvMF_0637 0.40 -0.6 761,209 + DvMF_0637 0.43 -0.6 761,214 - DvMF_0637 0.43 -2.9
Or see this region's nucleotide sequence