Strain Fitness in Shewanella loihica PV-4 around Shew_3485

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,169,174	-				-0.8
4,169,256	+				-0.1
4,169,759	-	slmA	Shew_3484	0.75	+0.1
4,169,867	-				-1.3
4,170,290	+		Shew_3485	0.12	-1.1
4,170,378	+		Shew_3485	0.16	-0.1
4,170,396	-		Shew_3485	0.17	-0.3
4,170,421	-		Shew_3485	0.19	-0.1
4,170,603	+		Shew_3485	0.28	-0.1
4,170,611	-		Shew_3485	0.28	+0.3
4,170,754	+		Shew_3485	0.36	+0.1
4,170,773	-		Shew_3485	0.37	+0.0
4,170,826	+		Shew_3485	0.39	+0.1
4,170,834	-		Shew_3485	0.40	+0.3
4,170,867	+		Shew_3485	0.41	-0.0
4,171,229	+		Shew_3485	0.60	-0.2
4,171,367	+		Shew_3485	0.67	-0.5
4,171,367	+		Shew_3485	0.67	+0.8
4,171,375	-		Shew_3485	0.67	+0.0
4,172,116	+				-0.0