Strain Fitness in Shewanella loihica PV-4 around Shew_3321

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,960,370	+		Shew_3320	0.61	-0.0
3,960,498	+		Shew_3320	0.69	+0.3
3,960,565	+		Shew_3320	0.74	+0.5
3,960,666	-		Shew_3320	0.80	-0.1
3,960,826	+		Shew_3320	0.90	-0.0
3,960,849	-				-0.1
3,960,921	+				+0.2
3,960,921	+				-0.4
3,961,198	-				-0.0
3,961,416	+		Shew_3321	0.34	-0.7
3,961,424	-		Shew_3321	0.36	-1.9
3,961,424	-		Shew_3321	0.36	-0.1
3,961,424	-		Shew_3321	0.36	+0.2
3,961,573	-		Shew_3321	0.55	+0.6
3,961,998	-				-0.0
3,962,112	-				-0.1
3,962,368	+		Shew_3322	0.14	+0.2
3,962,435	-		Shew_3322	0.22	-0.2
3,962,522	-		Shew_3322	0.31	-0.0
3,962,526	+		Shew_3322	0.31	-0.1
3,962,534	-		Shew_3322	0.32	+0.1
3,962,586	+		Shew_3322	0.38	-0.1
3,962,594	-		Shew_3322	0.39	-0.3
3,962,672	+		Shew_3322	0.47	-0.1
3,962,789	-		Shew_3322	0.60	+0.3
3,962,805	-		Shew_3322	0.62	+0.3
3,962,851	-		Shew_3322	0.67	+0.2
3,962,851	-		Shew_3322	0.67	+0.0