Strain Fitness in Shewanella loihica PV-4 around Shew_2546

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,001,920	+		Shew_2545	0.11	-0.0
3,001,939	-		Shew_2545	0.13	-0.4
3,001,941	+		Shew_2545	0.13	+0.4
3,002,086	+		Shew_2545	0.29	-0.7
3,002,150	+		Shew_2545	0.36	-0.1
3,002,439	-		Shew_2545	0.68	+0.2
3,002,974	+		Shew_2546	0.17	-0.2
3,003,199	-		Shew_2546	0.42	-0.2
3,003,210	-		Shew_2546	0.43	-0.1
3,003,425	+		Shew_2546	0.66	-0.1
3,003,766	-				+0.8
3,003,766	-				-0.1
3,003,766	-				+0.3
3,004,002	+				-0.0
3,004,242	-		Shew_2547	0.30	-0.0
3,004,242	-		Shew_2547	0.30	+0.4
3,004,394	+		Shew_2547	0.47	+0.1
3,004,394	+		Shew_2547	0.47	+0.8
3,004,545	+		Shew_2547	0.65	+0.5