Strain Fitness in Shewanella loihica PV-4 around Shew_2119

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,453,910	+		Shew_2117	0.55	-0.9
2,454,153	-				-0.4
2,454,474	+		Shew_2118	0.41	-0.4
2,454,533	+		Shew_2118	0.60	-0.1
2,454,571	-		Shew_2118	0.72	-0.1
2,454,648	+				-0.1
2,454,771	+				-0.1
2,454,858	-				-0.0
2,455,168	-		Shew_2119	0.29	-0.2
2,455,254	+		Shew_2119	0.34	-0.2
2,455,796	-		Shew_2119	0.67	-1.4
2,456,209	+				-0.1
2,456,749	-		Shew_2120	0.19	-0.2
2,457,143	+		Shew_2120	0.59	-0.0
2,457,151	-		Shew_2120	0.60	+0.0
2,457,274	-		Shew_2120	0.72	+0.5