Strain Fitness in Shewanella loihica PV-4 around Shew_1820

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,092,365	-				+0.4
2,092,365	-				-0.8
2,092,732	+		Shew_1819	0.63	+1.6
2,093,552	-	prpB	Shew_1820	0.64	-0.6
2,093,582	+	prpB	Shew_1820	0.67	-3.1
2,093,677	-	prpB	Shew_1820	0.78	-1.1
2,093,681	+	prpB	Shew_1820	0.79	-2.5
2,093,702	-	prpB	Shew_1820	0.81	-0.2
2,093,933	+				+0.8
2,093,933	+				-0.0
2,093,941	-				-0.8
2,094,037	-				-0.2
2,094,445	+		Shew_1821	0.42	+0.1
2,094,804	-		Shew_1821	0.74	+1.0